RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 AZU1P20160 251 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
PRPF40B-203ENST00000508736 J3QR89 54 aa8.31□□□□□ -1.08
PRPF40B-203ENST00000508736 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
PRPF40B-203ENST00000508736 CITED1Q99966 193 aa8.31□□□□□ -1.08
PRPF40B-203ENST00000508736 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 TRBV10-1A0A0K0K1A3 114 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 SMAGPQ0VAQ4 97 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 C9orf66Q5T8R8 295 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 ARL17AQ8IVW1 177 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 FAM104AQ969W3 186 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
PRPF40B-203ENST00000508736 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 TEX48A0A1B0GUV7 120 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 CFC1P0CG37 223 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 UBE2D3P61077 147 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 UBE2D2P62837 147 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 DGAT2L7PQ6IED9 249 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 Q6ZUT4 128 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 C10orf126Q8N4M7 172 aa8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-203ENST00000508736 STAB1Q9NY15 2570 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 TRBV20-1A0A075B6N2 111 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 IGHV3-38A0A0C4DH36 116 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 K7EQD1 137 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 WFDC2Q14508 124 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 Q9UF83 564 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 A0A0B4J2C4 111 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 DAZ2Q13117 558 aaKnown RBP8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 WFDC10AQ9H1F0 79 aa8.28□□□□□ -1.08
PRPF40B-203ENST00000508736 A4D1N5 150 aa8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 PSMB2P49721 201 aa8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 PRO0461Q9UI25 63 aa8.27□□□□□ -1.09
PRPF40B-203ENST00000508736 CIDEAO60543 219 aa8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 TIRAPP58753 221 aa8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 SHISA2Q6UWI4 295 aa8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 RPL35AP18077 110 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 C21orf62-AS1Q17RA5 79 aa8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 Q6ZTI0 123 aa8.26□□□□□ -1.09
PRPF40B-203ENST00000508736 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 HERVK_113P63121 156 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 ATP6V0E2Q8NHE4 81 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
PRPF40B-203ENST00000508736 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 WFDC9Q8NEX5 89 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
PRPF40B-203ENST00000508736 WIPF1O43516 503 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 TIMM17BO60830 172 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 MIAQ16674 131 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 MTURNQ8N3F0 131 aa8.23□□□□□ -1.09
PRPF40B-203ENST00000508736 TRGV2A0A075B6R0 118 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 TCL1BO95988 128 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 Q1RN00 199 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 SH2D6Q7Z4S9 175 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 FAM19A3Q7Z5A8 133 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 LITAFQ99732 161 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
PRPF40B-203ENST00000508736 UBE2L6O14933 153 aa8.21□□□□□ -1.09
PRPF40B-203ENST00000508736 NDUFA1O15239 70 aa8.21□□□□□ -1.09
PRPF40B-203ENST00000508736 PRSS2P07478 247 aa8.21□□□□□ -1.09
PRPF40B-203ENST00000508736 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.09
PRPF40B-203ENST00000508736 VWFP04275 2813 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE12JA6NER3 117 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 IFITM1P13164 125 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE4Q13068 117 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE5Q13069 117 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 KRTAP21-3Q3LHN1 58 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms