RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZNHIT1O43257 154 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 RNASE1P07998 156 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 Q75L30 129 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 BAHCC1Q9P281 2608 aa7.6□□□□□ -1.19
PDLIM5-210ENST00000508216 PRR14LQ5THK1 2151 aa7.6□□□□□ -1.19
PDLIM5-210ENST00000508216 BPY2O14599 106 aa7.6□□□□□ -1.19
PDLIM5-210ENST00000508216 SUMO4Q6EEV6 95 aa7.6□□□□□ -1.19
PDLIM5-210ENST00000508216 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 TFF2Q03403 129 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 C9orf66Q5T8R8 295 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 Q6ZQT0 140 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 LINC01356Q8N9X3 169 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 CADP27708 2225 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 DOCK10Q96BY6 2186 aa7.59□□□□□ -1.19
PDLIM5-210ENST00000508216 XP32Q5T750 250 aa7.59□□□□□ -1.2
PDLIM5-210ENST00000508216 CACNA1BQ00975 2339 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 CFAP54Q96N23 3096 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 LOC101927531A0A1B0GV80 90 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 LECT2O14960 151 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 TFF1P04155 84 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 LINC00313P59037 77 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 ZDBF2Q9HCK1 2354 aa7.58□□□□□ -1.2
PDLIM5-210ENST00000508216 XIRP2A4UGR9 3374 aa7.57□□□□□ -1.2
PDLIM5-210ENST00000508216 H3BQ85 93 aa7.57□□□□□ -1.2
PDLIM5-210ENST00000508216 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-210ENST00000508216 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
PDLIM5-210ENST00000508216 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
PDLIM5-210ENST00000508216 PRAC2D3DTV9 90 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 H0Y8X5 98 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 LY6G6DO95868 133 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 WDFY4Q6ZS81 3184 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 PLXNB1O43157 2135 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 SEC16AO15027 2179 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 CCL24O00175 119 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 ITLN2Q8WWU7 325 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 RNF5Q99942 180 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 C19orf73Q9NVV2 129 aa7.56□□□□□ -1.2
PDLIM5-210ENST00000508216 ZFHX4Q86UP3 3567 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 A8MU10 97 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 CCL3P10147 92 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 MP68P56378 58 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 DEFB114Q30KQ6 69 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
PDLIM5-210ENST00000508216 TRBV10-1A0A0K0K1A3 114 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 CHKB-CPT1BH3BT56 60 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 RNASE3P12724 160 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 IGHV3-21A0A0B4J1V1 117 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 C3orf84H3BNL1 204 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 K7EQG2 157 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 IGHV3-9P01782 118 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 RPL11P62913 178 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 CCL14Q16627 93 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
PDLIM5-210ENST00000508216 IGKV2-28A0A075B6P5 120 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 M0QY20 66 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 IGKV2D-28P01615 120 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 GNLYP22749 145 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 REV3LO60673 3130 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 C5orf42Q9H799 3197 aa7.53□□□□□ -1.2
PDLIM5-210ENST00000508216 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
PDLIM5-210ENST00000508216 H0Y9J4 135 aa7.52□□□□□ -1.21
PDLIM5-210ENST00000508216 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
PDLIM5-210ENST00000508216 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
PDLIM5-210ENST00000508216 SDK2Q58EX2 2172 aa7.52□□□□□ -1.21
PDLIM5-210ENST00000508216 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 SPTY2D1-AS1A0A0U1RR47 76 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 IGHV4-31P0DP07 118 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 DNAH12Q6ZR08 3092 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 HAMPP81172 84 aa7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-210ENST00000508216 MED13Q9UHV7 2174 aa7.5□□□□□ -1.21
PDLIM5-210ENST00000508216 Q9BRP9 147 aa7.5□□□□□ -1.21
PDLIM5-210ENST00000508216 SPTBN4Q9H254 2564 aa7.5□□□□□ -1.21
PDLIM5-210ENST00000508216 IGHV1-3A0A0C4DH29 117 aa7.49□□□□□ -1.21
PDLIM5-210ENST00000508216 NDUFB1O75438 58 aa7.49□□□□□ -1.21
PDLIM5-210ENST00000508216 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-210ENST00000508216 PRR9Q5T870 116 aa7.49□□□□□ -1.21
PDLIM5-210ENST00000508216 IGLV11-55A0A075B6I3 123 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 IGHV3-64DA0A0J9YX35 117 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 Q8N814 137 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 PRSS33Q8NF86 280 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 SND1-IT1Q9HBX3 110 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 DCHS1Q96JQ0 3298 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 ZNF318Q5VUA4 2279 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 Q6ZTI0 123 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 GAFA1Q96PS6 74 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
PDLIM5-210ENST00000508216 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms