RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RHODO00212 210 aa10.42□□□□□ -0.74
DDX41-208ENST00000507955 TRAV25A0A0B4J276 109 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 A4D1N5 150 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 LEPROTO15243 131 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
DDX41-208ENST00000507955 HIVEP1P15822 2718 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 SVIPQ8NHG7 77 aa10.41□□□□□ -0.74
DDX41-208ENST00000507955 RS1O15537 224 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 HILS1P60008 231 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 ATRQ13535 2644 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 C16orf95Q9H693 158 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 Q6ZUT4 128 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 SPATA3Q8NHX4 192 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
DDX41-208ENST00000507955 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
DDX41-208ENST00000507955 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
DDX41-208ENST00000507955 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
DDX41-208ENST00000507955 NDUFA7O95182 113 aa10.39□□□□□ -0.75
DDX41-208ENST00000507955 IGLV1-51P01701 117 aa10.38□□□□□ -0.75
DDX41-208ENST00000507955 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
DDX41-208ENST00000507955 C19orf73Q9NVV2 129 aa10.38□□□□□ -0.75
DDX41-208ENST00000507955 LY6G6DO95868 133 aa10.38□□□□□ -0.75
DDX41-208ENST00000507955 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
DDX41-208ENST00000507955 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
DDX41-208ENST00000507955 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 CIDEAO60543 219 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 H7C2G1 150 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 GAGE7O76087 117 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 PYGO1Q9Y3Y4 419 aa10.37□□□□□ -0.75
DDX41-208ENST00000507955 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 GAGE12JA6NER3 117 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 GAGE4Q13068 117 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 GAGE5Q13069 117 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 SCGB1C2P0DMR2 95 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.36□□□□□ -0.75
DDX41-208ENST00000507955 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
DDX41-208ENST00000507955 TRBV20-1A0A075B6N2 111 aa10.35□□□□□ -0.75
DDX41-208ENST00000507955 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
DDX41-208ENST00000507955 LITAFQ99732 161 aa10.35□□□□□ -0.75
DDX41-208ENST00000507955 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
DDX41-208ENST00000507955 NTM-AS1Q6ZSK4 140 aa10.35□□□□□ -0.75
DDX41-208ENST00000507955 ANKRD29Q8N6D5 301 aa10.35□□□□□ -0.75
DDX41-208ENST00000507955 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
DDX41-208ENST00000507955 MT-ATP8P03928 68 aa10.34□□□□□ -0.75
DDX41-208ENST00000507955 PPDPFLQ8WWR9 84 aa10.34□□□□□ -0.75
DDX41-208ENST00000507955 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
DDX41-208ENST00000507955 COX6A2Q02221 97 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 ADAMTSL4-AS1Q5T5F5 129 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 TRGV2A0A075B6R0 118 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 XGP55808 180 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 NPC2P61916 151 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
DDX41-208ENST00000507955 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 K7EQD1 137 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 PF4P02776 101 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
DDX41-208ENST00000507955 TEP1Q99973 2627 aaKnown RBP10.31□□□□□ -0.76
DDX41-208ENST00000507955 C9JAW5 83 aa10.31□□□□□ -0.76
DDX41-208ENST00000507955 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
DDX41-208ENST00000507955 SLC25A20O43772 301 aa10.3□□□□□ -0.76
DDX41-208ENST00000507955 TRAV13-1A0A0B4J241 112 aa10.3□□□□□ -0.76
DDX41-208ENST00000507955 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
DDX41-208ENST00000507955 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
DDX41-208ENST00000507955 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 IGHV1-58A0A0C4DH39 117 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 CRYBA4P53673 196 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 DAND5Q8N907 189 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
DDX41-208ENST00000507955 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
DDX41-208ENST00000507955 TINCRA0A1B0GVN0 87 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 PRSS2P07478 247 aa10.29□□□□□ -0.76
DDX41-208ENST00000507955 TRIAP1O43715 76 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 LINC00482Q8N8I6 264 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
DDX41-208ENST00000507955 Q1RN00 199 aa10.28□□□□□ -0.76
DDX41-208ENST00000507955 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.76
DDX41-208ENST00000507955 C16orf74Q96GX8 76 aa10.27□□□□□ -0.76
DDX41-208ENST00000507955 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms