RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.93□□□□□ -1.46
PROM1-206ENST00000505450 C11orf68Q9H3H3 251 aaKnown RBP5.93□□□□□ -1.46
PROM1-206ENST00000505450 U3KQE9 123 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 IGHV4-31P0DP07 118 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 XCL2Q9UBD3 114 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 ITPR1Q14643 2758 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 ELANEP08246 267 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 LMO4P61968 165 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 IGHV1-58A0A0C4DH39 117 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 COPS9Q8WXC6 57 aa5.93□□□□□ -1.46
PROM1-206ENST00000505450 ZNF415Q09FC8 603 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 C10orf99Q6UWK7 81 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 CDKN2A-AS1Q9UH64 79 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 A0A1W2PPR1 153 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 H3BT86 120 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 DEFB136Q30KP8 78 aa5.92□□□□□ -1.46
PROM1-206ENST00000505450 H7C423 109 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 CRPP02741 224 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 A0A0J9YX75 114 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 PAX4O43316 350 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
PROM1-206ENST00000505450 ADAMTSL4-AS1Q5T5F5 129 aa5.91□□□□□ -1.46
PROM1-206ENST00000505450 PFN2P35080 140 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 MRPL23Q16540 153 aaKnown RBP5.9□□□□□ -1.46
PROM1-206ENST00000505450 MIAQ16674 131 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 HIST2H2BDQ6DRA6 164 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 TRGV2A0A075B6R0 118 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 RPL32P62910 135 aaKnown RBP5.9□□□□□ -1.46
PROM1-206ENST00000505450 CFHR3Q02985 330 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 Q9HAA7 133 aa5.9□□□□□ -1.46
PROM1-206ENST00000505450 IGHG2P01859 326 aa5.9□□□□□ -1.47
PROM1-206ENST00000505450 DNAJC9-AS1A6NH13 148 aa5.9□□□□□ -1.47
PROM1-206ENST00000505450 KLLNB2CW77 178 aa5.9□□□□□ -1.47
PROM1-206ENST00000505450 RPL36AP83881 106 aaKnown RBP5.9□□□□□ -1.47
PROM1-206ENST00000505450 RPL36ALQ969Q0 106 aaKnown RBP5.9□□□□□ -1.47
PROM1-206ENST00000505450 LINC00315P59091 139 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 APRG1Q8IVJ8 170 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 COL27A1Q8IZC6 1860 aaPredicted RBP5.89□□□□□ -1.47
PROM1-206ENST00000505450 IGKV3D-7A0A0C4DH55 119 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 TRBV6-5A0A0K0K1A5 114 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 TINCRA0A1B0GVN0 87 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 NXPH4O95158 308 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 C11orf71Q6IPW1 123 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 SHISA2Q6UWI4 295 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 VSIG2Q96IQ7 327 aa5.89□□□□□ -1.47
PROM1-206ENST00000505450 LINC00467Q9BRT7 94 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 ASH1LQ9NR48 2969 aaKnown RBP5.88□□□□□ -1.47
PROM1-206ENST00000505450 STHQ8IWL8 128 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 SPANXA1Q9NS26 97 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 VPREB3Q9UKI3 123 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 TMEM61Q8N0U2 210 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 DAZ2Q13117 558 aaKnown RBP5.88□□□□□ -1.47
PROM1-206ENST00000505450 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
PROM1-206ENST00000505450 ODF3Q96PU9 254 aa5.88□□□□□ -1.47
PROM1-206ENST00000505450 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
PROM1-206ENST00000505450 SOCS3O14543 225 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 H3BUA1 57 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 INAFM2P0DMQ5 153 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 SLURP1P55000 103 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 CITED1Q99966 193 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 LST1O00453 97 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 HERVK_113P63121 156 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 PIK3CD-AS1Q5SR53 167 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 DCANP1Q8TF63 244 aa5.87□□□□□ -1.47
PROM1-206ENST00000505450 C9orf85Q96MD7 179 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 K7EMT4 169 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 Q9UF83 564 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 TRGV4A0A0C4DH28 118 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 K7EQG2 157 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 INSP01308 110 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
PROM1-206ENST00000505450 ATP5G1P05496 136 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 SBSPONQ8IVN8 264 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 A6NDX4 124 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 NDUFA7O95182 113 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 NHLRC4P0CG21 123 aaPredicted RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 RPL35AP18077 110 aaKnown RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 C6orf226Q5I0X4 101 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 PEMTQ9UBM1 199 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 RBMY1BA6NDE4 496 aaKnown RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 RBMY1EA6NEQ0 496 aaKnown RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 COX7A2LO14548 114 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 ACYP1P07311 99 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 RBMY1DP0C7P1 496 aaKnown RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 RBMY1A1P0DJD3 496 aaKnown RBP5.85□□□□□ -1.47
PROM1-206ENST00000505450 RBMY1CP0DJD4 496 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 UBE2DNLQ8IWF7 75 aa5.85□□□□□ -1.47
PROM1-206ENST00000505450 MRPS36P82909 103 aaKnown RBP5.84□□□□□ -1.47
PROM1-206ENST00000505450 C5orf38Q86SI9 138 aa5.84□□□□□ -1.47
PROM1-206ENST00000505450 LINC00643Q86TS7 51 aa5.84□□□□□ -1.47
PROM1-206ENST00000505450 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
PROM1-206ENST00000505450 LAMA5O15230 3695 aa5.84□□□□□ -1.47
PROM1-206ENST00000505450 SDIM1Q6ZPB5 146 aa5.84□□□□□ -1.47
PROM1-206ENST00000505450 AMELXQ99217 191 aa5.84□□□□□ -1.47
PROM1-206ENST00000505450 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms