RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 PSCAO43653 123 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 SCGB1D1O95968 90 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 SMR3BP02814 79 aaPredicted RBP3.2□□□□□ -1.9
CDH9-203ENST00000505045 ADIRFQ15847 76 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 PIK3CD-AS1Q5SR53 167 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 Q5VSD8 79 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 PRR27Q6MZM9 219 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 MPLKIPQ8TAP9 179 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 SFRP2Q96HF1 295 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 TM2D2Q9BX73 214 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 PHLDA3Q9Y5J5 127 aa3.2□□□□□ -1.9
CDH9-203ENST00000505045 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 RHODO00212 210 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 UBE2D3P61077 147 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 RPL23P62829 140 aaKnown RBP3.19□□□□□ -1.9
CDH9-203ENST00000505045 UBE2D2P62837 147 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 LAGE3Q14657 143 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 KCNIP4Q6PIL6 250 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 NIT1Q86X76 327 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 SMIM7Q9BQ49 75 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 MIEN1Q9BRT3 115 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.19□□□□□ -1.9
CDH9-203ENST00000505045 EPM2AB3EWF7 344 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 TMEM250H0YL14 139 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 SNAI2O43623 268 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 CIDEAO60543 219 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 MPV17L2Q567V2 206 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 CENPWQ5EE01 88 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 NEXN-AS1Q8NBZ9 246 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
CDH9-203ENST00000505045 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 COTL1Q14019 142 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 ZNF56Q15929 161 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 COL5A1-AS1Q5SY13 56 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 TEX43Q6ZNM6 134 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 Q6ZSA8 131 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 NTM-AS1Q6ZSK4 140 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 BAGE2Q86Y30 109 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 BAALCQ8WXS3 180 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 MANBALQ9NQG1 85 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 KLK12Q9UKR0 248 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 TRAPPC1Q9Y5R8 145 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 KIF25-AS1Q9Y6Z4 181 aa3.18□□□□□ -1.9
CDH9-203ENST00000505045 TRBV7-3A0A075B6L6 115 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 ESDP10768 282 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 MEF2BQ02080 365 aaPredicted RBP3.17□□□□□ -1.9
CDH9-203ENST00000505045 CLPSL2Q6UWE3 100 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 Q8N976 141 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 OR10G8Q8NGN5 311 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
CDH9-203ENST00000505045 IGKV2D-24A0A075B6R9 120 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TRAV9-1A0A075B6T8 112 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TRBV6-8A0A0A6YYG3 113 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 NUPR1O60356 82 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 RPL36AP83881 106 aaKnown RBP3.16□□□□□ -1.9
CDH9-203ENST00000505045 SPANXN1Q5VSR9 72 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 ENHOQ6UWT2 76 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 UBE2WQ96B02 151 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TMEM70Q9BUB7 260 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 VAMP8Q9BV40 100 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TPPP3Q9BW30 176 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 PKHD1L1Q86WI1 4243 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 K7EN84 100 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 SCXQ7RTU7 201 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
CDH9-203ENST00000505045 A0A087WX48 190 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 C20orf202A1L168 122 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 M0QY20 66 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 PRYO14603 147 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 HLA-DQA1P01909 254 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 MGPP08493 103 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 INAFM2P0DMQ5 153 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 GNG4P50150 75 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
CDH9-203ENST00000505045 RBX1P62877 108 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 Q0VG73 95 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 BATFQ16520 125 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 KRTAP26-1Q6PEX3 210 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 FER1L6-AS1Q8NA97 138 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
CDH9-203ENST00000505045 RNASE7Q9H1E1 156 aaKnown RBP3.15□□□□□ -1.91
CDH9-203ENST00000505045 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 PDE6DO43924 150 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 ANGP03950 147 aaKnown RBP3.14□□□□□ -1.91
CDH9-203ENST00000505045 CTRLP40313 264 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 GAGE6Q13070 117 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 COX19Q49B96 90 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 CHCHD5Q9BSY4 110 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms