RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 IGKV2-29A2NJV5 120 aaPredicted RBP3.3□□□□□ -1.88
LMNB1-208ENST00000504788 IGIPA6NJ69 53 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 H7C423 109 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 K7EMI3 77 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 NUPR1O60356 82 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BOP23527 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BBP33778 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BDP58876 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BCP62807 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
LMNB1-208ENST00000504788 Q0VG73 95 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 COTL1Q14019 142 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 LAGE3Q14657 143 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST2H2BEQ16778 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BHQ93079 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BNQ99877 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 HIST1H2BMQ99879 126 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 LOC389332A0A1B0GUA5 103 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 FGF6P10767 208 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 PMCHP20382 165 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 AMTP48728 403 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 TIMM21Q9BVV7 248 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 MAP1LC3AQ9H492 121 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 NXT2Q9NPJ8 142 aaKnown RBP3.29□□□□□ -1.88
LMNB1-208ENST00000504788 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
LMNB1-208ENST00000504788 TRAV8-6A0A0B4J262 113 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 A0A1B0GVY2 172 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 LRCOL1A6NCL2 159 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 M0R2N4 97 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 IGHV3-30P01768 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 IGHV3-33P01772 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 IGHV3-30-3P0DP02 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 IGHV3-30-5P0DP03 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 GAGE6Q13070 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 COA6Q5JTJ3 125 aaKnown RBP3.28□□□□□ -1.88
LMNB1-208ENST00000504788 UBE2DNLQ8IWF7 75 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 OPRPNQ99935 248 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-208ENST00000504788 CHCHD5Q9BSY4 110 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 PYGO1Q9Y3Y4 419 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 DNAH8Q96JB1 4490 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 APOBP04114 4563 aaKnown RBP3.28□□□□□ -1.88
LMNB1-208ENST00000504788 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 LINC00614P0C842 121 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 ZNF25P17030 456 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-208ENST00000504788 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
LMNB1-208ENST00000504788 WFDC2Q14508 124 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 TOMM6Q96B49 74 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 AMELXQ99217 191 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 KLK12Q9UKR0 248 aa3.28□□□□□ -1.88
LMNB1-208ENST00000504788 REG3AQ06141 175 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 ORMDL2Q53FV1 153 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 PDZD11Q5EBL8 140 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 TTC32Q5I0X7 151 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 Q6ZUT4 128 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 FAM19A3Q7Z5A8 133 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 LINC00269Q8N2A0 174 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 C10orf126Q8N4M7 172 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
LMNB1-208ENST00000504788 A0A087WX48 190 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 SERF1AO75920 110 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 S100A6P06703 90 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 NPSP0C0P6 89 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 FCER1GP30273 86 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 ZNF664Q8N3J9 261 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.26□□□□□ -1.89
LMNB1-208ENST00000504788 AP5S1Q9NUS5 200 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 TMEM262E9PQX1 116 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 ANGP03950 147 aaKnown RBP3.26□□□□□ -1.89
LMNB1-208ENST00000504788 PMCHL1Q16048 86 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 MIAQ16674 131 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 RNASE13Q5GAN3 156 aaKnown RBP3.26□□□□□ -1.89
LMNB1-208ENST00000504788 ZC2HC1BQ5TFG8 222 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 CDPF1Q6NVV7 123 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 ERASQ7Z444 233 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 OR5A1Q8NGJ0 315 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 PRSS3P2Q8NHM4 247 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 UBE2WQ96B02 151 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 CHCHD1Q96BP2 118 aaKnown RBP3.26□□□□□ -1.89
LMNB1-208ENST00000504788 TIMM17AQ99595 171 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 SPANXA1Q9NS26 97 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 CYSLTR1Q9Y271 337 aa3.26□□□□□ -1.89
LMNB1-208ENST00000504788 TRAV9-2A0A087WT02 112 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 TRAV8-3A0A0A6YYJ7 113 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 PKIAP61925 76 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 FOXI1Q12951 378 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 C1orf134Q5TEV5 83 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 FAM19A2Q8N3H0 131 aa3.25□□□□□ -1.89
LMNB1-208ENST00000504788 NTN5Q8WTR8 489 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms