RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 Q6ZUT4 128 aa8.86□□□□□ -0.99
PDLIM7-212ENST00000504380 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
PDLIM7-212ENST00000504380 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
PDLIM7-212ENST00000504380 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
PDLIM7-212ENST00000504380 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
PDLIM7-212ENST00000504380 TRAV8-3A0A0A6YYJ7 113 aa8.85□□□□□ -0.99
PDLIM7-212ENST00000504380 LINC00614P0C842 121 aa8.85□□□□□ -0.99
PDLIM7-212ENST00000504380 TNP2Q05952 138 aa8.85□□□□□ -0.99
PDLIM7-212ENST00000504380 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
PDLIM7-212ENST00000504380 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
PDLIM7-212ENST00000504380 K7EMI3 77 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 Q0VG73 95 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 ZC2HC1BQ5TFG8 222 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 BAGE3Q86Y29 109 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 TIMM21Q9BVV7 248 aa8.84□□□□□ -0.99
PDLIM7-212ENST00000504380 KIAA1109Q2LD37 5005 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 DNAH2Q9P225 4427 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 MAPKAPK5-AS1Q8N8E1 139 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 TOMM6Q96B49 74 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 AP5S1Q9NUS5 200 aa8.83□□□□□ -1
PDLIM7-212ENST00000504380 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
PDLIM7-212ENST00000504380 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
PDLIM7-212ENST00000504380 A0A096LNJ9 63 aa8.82□□□□□ -1
PDLIM7-212ENST00000504380 PSCAO43653 123 aa8.82□□□□□ -1
PDLIM7-212ENST00000504380 MIAQ16674 131 aa8.82□□□□□ -1
PDLIM7-212ENST00000504380 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 IGIPA6NJ69 53 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 LECT2O14960 151 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 NUPR1O60356 82 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BKO60814 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 SERF1AO75920 110 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BJP06899 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BOP23527 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BBP33778 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BDP58876 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 LINC00310P59036 64 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 RAB5BP61020 215 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BCP62807 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 SMAGPQ0VAQ4 97 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 WFDC2Q14508 124 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
PDLIM7-212ENST00000504380 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 BAALCQ8WXS3 180 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BHQ93079 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 RMI2Q96E14 147 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BNQ99877 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 HIST1H2BMQ99879 126 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 TM2D2Q9BX73 214 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
PDLIM7-212ENST00000504380 DNAH17Q9UFH2 4485 aa8.8□□□□□ -1
PDLIM7-212ENST00000504380 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
PDLIM7-212ENST00000504380 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
PDLIM7-212ENST00000504380 MRPS36P82909 103 aaKnown RBP8.8□□□□□ -1
PDLIM7-212ENST00000504380 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
PDLIM7-212ENST00000504380 CCL25O15444 150 aa8.79□□□□□ -1
PDLIM7-212ENST00000504380 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
PDLIM7-212ENST00000504380 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
PDLIM7-212ENST00000504380 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
PDLIM7-212ENST00000504380 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
PDLIM7-212ENST00000504380 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
PDLIM7-212ENST00000504380 TMEM141Q96I45 108 aa8.79□□□□□ -1
PDLIM7-212ENST00000504380 TRAV8-4A0A0B4J246 113 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 IFITM10A6NMD0 228 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 HBDP02042 147 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 G0S2P27469 103 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 XCL1P47992 114 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 ERASQ7Z444 233 aa8.78□□□□□ -1
PDLIM7-212ENST00000504380 A0A087WTM6 91 aa8.77□□□□□ -1.01
PDLIM7-212ENST00000504380 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
PDLIM7-212ENST00000504380 HSBP1O75506 76 aa8.77□□□□□ -1.01
PDLIM7-212ENST00000504380 SS18Q15532 418 aa8.77□□□□□ -1.01
PDLIM7-212ENST00000504380 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
PDLIM7-212ENST00000504380 FOXI1Q12951 378 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 AMELXQ99217 191 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 TIMM17AQ99595 171 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 VCX2Q9H322 139 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
PDLIM7-212ENST00000504380 A0A1B0GVY2 172 aa8.75□□□□□ -1.01
PDLIM7-212ENST00000504380 NDUFA6P56556 154 aa8.75□□□□□ -1.01
PDLIM7-212ENST00000504380 Q6ZN92 141 aa8.75□□□□□ -1.01
PDLIM7-212ENST00000504380 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
PDLIM7-212ENST00000504380 COX6A2Q02221 97 aa8.74□□□□□ -1.01
PDLIM7-212ENST00000504380 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 NPSP0C0P6 89 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 UBE2D1P51668 147 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 C2orf88Q9BSF0 95 aa8.73□□□□□ -1.01
PDLIM7-212ENST00000504380 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
PDLIM7-212ENST00000504380 FABP4P15090 132 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms