RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TRGV4A0A0C4DH28 118 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 FXYD2P54710 66 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 OPRPNQ99935 248 aaPredicted RBP6.97□□□□□ -1.29
COL1A1-210ENST00000504289 Q9UF83 564 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 DNHD1Q96M86 4753 aa6.97□□□□□ -1.29
COL1A1-210ENST00000504289 A0A0J9YY99 117 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 LINC00694P0DN24 101 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 UBE2D1P51668 147 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 HERVK_113P63121 156 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 FHL2Q14192 279 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 Q6ZVH6 145 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 PHLDA1Q8WV24 401 aaPredicted RBP6.96□□□□□ -1.3
COL1A1-210ENST00000504289 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 X6R8D5 127 aa6.96□□□□□ -1.3
COL1A1-210ENST00000504289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
COL1A1-210ENST00000504289 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
COL1A1-210ENST00000504289 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
COL1A1-210ENST00000504289 EMP1P54849 157 aa6.95□□□□□ -1.3
COL1A1-210ENST00000504289 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
COL1A1-210ENST00000504289 DEFB104AQ8WTQ1 72 aa6.95□□□□□ -1.3
COL1A1-210ENST00000504289 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
COL1A1-210ENST00000504289 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
COL1A1-210ENST00000504289 ATRQ13535 2644 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 TEX48A0A1B0GUV7 120 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 A0A1W2PPM0 123 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 CCL25O15444 150 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 FABP2P12104 132 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 MIFP14174 115 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 GAGE4Q13068 117 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 GAGE5Q13069 117 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 AMMECR1LQ6DCA0 310 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 NTM-AS1Q6ZSK4 140 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 Q6ZUT4 128 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 VSIG2Q96IQ7 327 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
COL1A1-210ENST00000504289 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 UBE2L6O14933 153 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 TIMM17BO60830 172 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 IGHV3-30-3P0DP02 117 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 SAMD5Q5TGI4 173 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 RNF183Q96D59 192 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 NHP2Q9NX24 153 aaKnown RBP6.93□□□□□ -1.3
COL1A1-210ENST00000504289 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
COL1A1-210ENST00000504289 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 A8MZ25 164 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 H3BUT2 72 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 K7EP34 96 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 ZFAND6Q6FIF0 208 aa6.92□□□□□ -1.3
COL1A1-210ENST00000504289 CEMP1Q6PRD7 247 aaPredicted RBP6.92□□□□□ -1.3
COL1A1-210ENST00000504289 CUBNO60494 3623 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 IGLL5B9A064 214 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 RPL24P83731 157 aaKnown RBP6.91□□□□□ -1.3
COL1A1-210ENST00000504289 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 SH2D6Q7Z4S9 175 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 PPDPFQ9H3Y8 114 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 VWFP04275 2813 aa6.91□□□□□ -1.3
COL1A1-210ENST00000504289 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
COL1A1-210ENST00000504289 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
COL1A1-210ENST00000504289 COL6A5A8TX70 2615 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 NDUFA1O15239 70 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 IFITM1P13164 125 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 SPCS1Q9Y6A9 102 aa6.89□□□□□ -1.31
COL1A1-210ENST00000504289 ATP5G1P05496 136 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 HERV-K104P63124 156 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
COL1A1-210ENST00000504289 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 C10orf126Q8N4M7 172 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 Q8NAQ8 132 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 SPATA3Q8NHX4 192 aa6.88□□□□□ -1.31
COL1A1-210ENST00000504289 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms