RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 IGLV4-60A0A075B6I1 120 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 IGIPA6NJ69 53 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 ATP5LO75964 103 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 NPSP0C0P6 89 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
CYSTM1-202ENST00000504227 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 FABP4P15090 132 aa9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 SNRPEP62304 92 aaKnown RBP9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 Q6ZN92 141 aa9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
CYSTM1-202ENST00000504227 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 S100A2P29034 98 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 Q6ZUT4 128 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 VCX2Q9H322 139 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
CYSTM1-202ENST00000504227 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
CYSTM1-202ENST00000504227 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
CYSTM1-202ENST00000504227 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
CYSTM1-202ENST00000504227 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
CYSTM1-202ENST00000504227 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
CYSTM1-202ENST00000504227 IBA57-AS1B1ANH7 110 aa9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 CRPP02741 224 aa9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 PACRGQ96M98 296 aaPredicted RBP9.36□□□□□ -0.91
CYSTM1-202ENST00000504227 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 PRSS1P07477 247 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 REG3AQ06141 175 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
CYSTM1-202ENST00000504227 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 LCE6AA0A183 80 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 IFITM10A6NMD0 228 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 BAALCQ8WXS3 180 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 AMELXQ99217 191 aa9.34□□□□□ -0.91
CYSTM1-202ENST00000504227 DNAH6Q9C0G6 4158 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 M0R2N4 97 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 CCL25O15444 150 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 PMVKQ15126 192 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 MIAQ16674 131 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 CST9LQ9H4G1 147 aa9.33□□□□□ -0.92
CYSTM1-202ENST00000504227 TRAV8-4A0A0B4J246 113 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 SS18Q15532 418 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 RMI2Q96E14 147 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 HIST1H2BLQ99880 126 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 Q9HAA7 133 aa9.32□□□□□ -0.92
CYSTM1-202ENST00000504227 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
CYSTM1-202ENST00000504227 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
CYSTM1-202ENST00000504227 Q6ZR54 194 aa9.31□□□□□ -0.92
CYSTM1-202ENST00000504227 LYSTQ99698 3801 aa9.3□□□□□ -0.92
CYSTM1-202ENST00000504227 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
CYSTM1-202ENST00000504227 H0Y8G0 127 aa9.3□□□□□ -0.92
CYSTM1-202ENST00000504227 NFE4Q86UQ8 179 aa9.3□□□□□ -0.92
CYSTM1-202ENST00000504227 IGLV10-54A0A075B6I4 117 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 UBE2D1P51668 147 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 KRTDAPP60985 99 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 CHCHD10Q8WYQ3 142 aaPredicted RBP9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
CYSTM1-202ENST00000504227 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
CYSTM1-202ENST00000504227 SEC11AP67812 179 aa9.28□□□□□ -0.92
CYSTM1-202ENST00000504227 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
CYSTM1-202ENST00000504227 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
CYSTM1-202ENST00000504227 A0A0J9YXV3 536 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 XCL1P47992 114 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 GEMIN7Q9H840 131 aaKnown RBP9.27□□□□□ -0.93
CYSTM1-202ENST00000504227 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 LINC00242Q5T6M2 205 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
CYSTM1-202ENST00000504227 C20orf202A1L168 122 aa9.25□□□□□ -0.93
CYSTM1-202ENST00000504227 F8VRH5 84 aa9.25□□□□□ -0.93
CYSTM1-202ENST00000504227 HERVK_113P63121 156 aa9.25□□□□□ -0.93
CYSTM1-202ENST00000504227 ODF1Q14990 250 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms