RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 IGKV1D-37A0A075B6S9 117 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 CTXND1A0A1B0GTU2 59 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 LYNX1G3V0Z9 82 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 ZNF861PO60384 105 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 GGCTO75223 188 aaKnown RBP2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 IGHV3-7P01780 117 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 LYNX1P0DP58 116 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 IAPPP10997 89 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 FGF7P21781 194 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 YPEL3P61236 119 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 AKR1C1Q04828 323 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 FXYD3Q14802 87 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 SDIM1Q6ZPB5 146 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 UBALD1Q8TB05 177 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 C10orf105Q8TEF2 133 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 NABP2Q9BQ15 211 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 MANBALQ9NQG1 85 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 SMCO4Q9NRQ5 59 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 TMEM242Q9NWH2 141 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 METTL1Q9UBP6 276 aaKnown RBP2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 CHD3Q12873 2000 aaKnown RBP2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 G3V3Q6 166 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 NPFFO15130 113 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 HYPMO75409 117 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 IGHV1-69P01742 117 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 S100A8P05109 93 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 GPX1P07203 203 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 CCL3L1P16619 93 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 RPL35P42766 123 aaKnown RBP2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 AKR1D1P51857 326 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 NDUFA6P56556 154 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 EBI3Q14213 229 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 KIAA2026Q5HYC2 2103 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 Q5W150 140 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 C2orf91Q6ZV80 131 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 HIST3H2BBQ8N257 126 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 C10orf126Q8N4M7 172 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 TTC9CQ8N5M4 171 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 LEAP2Q969E1 77 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 TVP23CQ96ET8 276 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 USMG5Q96IX5 58 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 OSTCQ9NRP0 149 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 RPRMQ9NS64 109 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 HILPDAQ9Y5L2 63 aa2.76□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRBV7-1A0A0A6YYK4 115 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRAV13-1A0A0B4J241 112 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 FAM236AA0A1B0GUQ0 79 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 FAM236BA0A1B0GV22 79 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 C20orf202A1L168 122 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 PANO1I0J062 215 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 MSMBP08118 114 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 HIST1H4AP62805 103 aaKnown RBP2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 HBBP68871 147 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 DIAPH2-AS1Q14236 149 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 LDLRAD2Q5SZI1 272 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 C10orf113Q5VZT2 155 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 MIR17HGQ75NE6 70 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 VMO1Q7Z5L0 202 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 LYPD1Q8N2G4 141 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 CLDND2Q8NHS1 167 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRGV9Q99603 122 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 HIST1H2BLQ99880 126 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 NPCDR1Q9BY65 106 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 REG4Q9BYZ8 158 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 XAGE1AQ9HD64 81 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 EPDR1Q9UM22 224 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 ARL2-SNX15V9GYD0 113 aa2.75□□□□□ -1.97
HMGB1P21-201ENST00000502313 A0A087WWC5 75 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 UBE2L5PA0A1B0GUS4 154 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 TCRBV4S1A1TA0A5B7 111 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 ZNF727A8MUV8 499 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 GGTLC3B5MD39 225 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 H3BUA1 57 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 TFF1P04155 84 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 SFTA3P0C7M3 94 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 SAA1P0DJI8 122 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 FXYD7P58549 80 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 SOSTDC1Q6X4U4 206 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 CYP2G1PQ6ZSU1 146 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 SIGLECL1Q8N7X8 197 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 CMTM2Q8TAZ6 248 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 IMMP2LQ96T52 175 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 BPESC1Q9GZL8 116 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 RPS10P5Q9NQ39 176 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 NIT2Q9NQR4 276 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 LY96Q9Y6Y9 160 aa2.74□□□□□ -1.97
HMGB1P21-201ENST00000502313 TRAV3A0A0B4J244 114 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms