RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 UGGT2Q9NYU1 1516 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 TRAV23DV6A0A075B6W5 121 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 A0A087WVE0 104 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 A0A096LNT2 108 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 A0A0J9YY99 117 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV6-5A0A0K0K1A5 114 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV10-3A0A0K0K1G6 114 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 TMEM30CPA0ZSE6 113 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 CRYM-AS1A6NIL9 109 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 F8W1H4 67 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 G3V318 75 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 CHKB-CPT1BH3BT56 60 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SYS1-DBNDD2H3BUS1 97 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 M0R3E3 92 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 HMGN4O00479 90 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 LYRM1O43325 122 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 YPEL1O60688 119 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SIX6O95475 246 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 CCL3L1P16619 93 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 FAUP35544 74 aaKnown RBP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SPINT3P49223 89 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 POLR2JP52435 117 aaKnown RBP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ZNF137PP52743 207 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SPINK7P58062 85 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 FXYD4P59646 89 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ELOF1P60002 83 aaKnown RBP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 HAMPP81172 84 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ZNF56Q15929 161 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SPANXN5Q5MJ07 72 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 SPANXN1Q5VSR9 72 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 VMO1Q7Z5L0 202 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 COA5Q86WW8 74 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 AMELXQ99217 191 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 MANBALQ9NQG1 85 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 PSENENQ9NZ42 101 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 V9GYS6 101 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 KIF20BQ96Q89 1820 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 EDC4Q6P2E9 1401 aaKnown RBP0.35□□□□□ -2.35
TRBVA-201ENST00000498804 CFAP74Q9C0B2 1584 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 MED12LQ86YW9 2145 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ABCA1O95477 2261 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 PKD1L3Q7Z443 1732 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 MED12Q93074 2177 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ROS1P08922 2347 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 CACNA1BQ00975 2339 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 ABCA9Q8IUA7 1624 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 RGPD8O14715 1765 aaPredicted RBP0.34□□□□□ -2.35
TRBVA-201ENST00000498804 MROH2AA6NES4 1674 aa0.34□□□□□ -2.35
TRBVA-201ENST00000498804 ZGRF1Q86YA3 2104 aa0.34□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV7-3A0A075B6L6 115 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 TRGV1A0A0A0MS02 117 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 TRBV7-1A0A0A6YYK4 115 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 TRBV10-1A0A0K0K1A3 114 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 A0A1W2PPM0 123 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 FAM24AA6NFZ4 105 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 F8WEM9 126 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 JMJD7-PLA2G4BH0Y9G9 81 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 UNC13BO14795 1591 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 S100A3P33764 101 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 BLMP54132 1417 aaPredicted RBP0.34□□□□□ -2.36
TRBVA-201ENST00000498804 CCL18P55774 89 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 EDDM3BP56851 147 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 DCDP81605 110 aaKnown RBP0.34□□□□□ -2.36
TRBVA-201ENST00000498804 PEA15Q15121 130 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 ELOBQ15370 118 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 NMSQ5H8A3 153 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 C10orf128Q5T292 105 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 BVES-AS1Q5T3Y7 98 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 CFAP126Q5VTH2 177 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 DEFB132Q7Z7B7 95 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 SERP2Q8N6R1 65 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 DOT1LQ8TEK3 1739 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 AQP10Q96PS8 301 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 PRR15LQ9BU68 103 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 Q9H521 79 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 SAR1AQ9NR31 198 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 NDUFB11Q9NX14 153 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 NHP2Q9NX24 153 aaKnown RBP0.34□□□□□ -2.36
TRBVA-201ENST00000498804 PLAC8Q9NZF1 115 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 ORMDL1Q9P0S3 153 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 INO80Q9ULG1 1556 aaPredicted RBP0.34□□□□□ -2.36
TRBVA-201ENST00000498804 SPCS1Q9Y6A9 102 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 MED13LQ71F56 2210 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 SCN11AQ9UI33 1791 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 PRXQ9BXM0 1461 aa0.34□□□□□ -2.36
TRBVA-201ENST00000498804 C5P01031 1676 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 SHPRHQ149N8 1683 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 POLR1AO95602 1720 aaPredicted RBP0.33□□□□□ -2.36
TRBVA-201ENST00000498804 NRAPQ86VF7 1730 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 FMN2Q9NZ56 1722 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 CRYBG1Q9Y4K1 1723 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 F5P12259 2224 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 CDC42BPGQ6DT37 1551 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 DAPK1P53355 1430 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 RGPD5Q99666 1765 aa0.33□□□□□ -2.36
TRBVA-201ENST00000498804 IGKV2-40A0A087WW87 121 aaPredicted RBP0.33□□□□□ -2.36
TRBVA-201ENST00000498804 LOC110117498A0A087WWA1 95 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms