RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 CEMP1Q6PRD7 247 aaPredicted RBP5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 GTSF1LQ9H1H1 148 aa5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 VCX2Q9H322 139 aa5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 CST9LQ9H4G1 147 aa5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 HHLA3Q9XRX5 114 aa5.68□□□□□ -1.5
PDZRN3-212ENST00000498048 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 PAX4O43316 350 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 FGF6P10767 208 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 CTAG1AP78358 180 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 AMELXQ99217 191 aa5.67□□□□□ -1.5
PDZRN3-212ENST00000498048 PKD1L1Q8TDX9 2849 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 A0A0J9YY99 117 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 F5H768 121 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 M0R143 59 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 PRB2P02812 416 aaPredicted RBP5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 MRPS36P82909 103 aaKnown RBP5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 BATFQ16520 125 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 TMEM170BQ5T4T1 132 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 NFE4Q86UQ8 179 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 ATP6V0E2Q8NHE4 81 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 SPATA25Q9BR10 227 aa5.66□□□□□ -1.5
PDZRN3-212ENST00000498048 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 TRAV8-6A0A0B4J262 113 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 A0A0J9YXV3 536 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 E9PLD3 99 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 H3BS24 57 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 H7C423 109 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 K7EIL1 84 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 DLEU1O43261 78 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 ZNF22P17026 224 aaPredicted RBP5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 GAGE6Q13070 117 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 KPRPQ5T749 579 aaPredicted RBP5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 C2orf91Q6ZV80 131 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 BOD1L2Q8IYS8 172 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 SNHG12Q9BXW3 62 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 MRPS16Q9Y3D3 137 aaKnown RBP5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 ICOSQ9Y6W8 199 aa5.65□□□□□ -1.5
PDZRN3-212ENST00000498048 NBEAL2Q6ZNJ1 2754 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 A0A096LPF7 62 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 A0A0J9YWU9 116 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 FAM104AQ969W3 186 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 CSDC2Q9Y534 153 aaKnown RBP5.64□□□□□ -1.51
PDZRN3-212ENST00000498048 NOTCH1P46531 2555 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 HINT1P49773 126 aaPredicted RBP5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 UBE2D1P51668 147 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 C12orf74Q32Q52 190 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 LBHQ53QV2 105 aaPredicted RBP5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 GEMIN7Q9H840 131 aaKnown RBP5.63□□□□□ -1.51
PDZRN3-212ENST00000498048 IGHV3-64A0A075B6Q5 118 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 HSD52Q0P140 79 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 MRPL23Q16540 153 aaKnown RBP5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 Q6ZTC4 211 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 SH2D6Q7Z4S9 175 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 TM2D3Q9BRN9 247 aa5.62□□□□□ -1.51
PDZRN3-212ENST00000498048 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 H3BRM9 83 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 LEPROTO15243 131 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 SIVA1O15304 175 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 HERVK_113P63121 156 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 SEC11AP67812 179 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 DEFB121Q5J5C9 76 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 MRAPQ8TCY5 172 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
PDZRN3-212ENST00000498048 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 J3QQQ9 107 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 SPINK8P0C7L1 97 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 NANOS2P60321 138 aaKnown RBP5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 BVES-AS1Q5T3Y7 98 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 C11orf45Q8TAV5 145 aa5.6□□□□□ -1.51
PDZRN3-212ENST00000498048 TIRAPP58753 221 aa5.59□□□□□ -1.51
PDZRN3-212ENST00000498048 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
PDZRN3-212ENST00000498048 LELP1Q5T871 98 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms