RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 CPSF4LA6NMK7 179 aaKnown RBP1.32□□□□□ -2.2
CBX3-208ENST00000497498 TMEM14DPA8MWL7 114 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 IGLL5B9A064 214 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 F2Z2F3 143 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 H3BT86 120 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 CCDC179H3BU77 68 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 J3QQQ9 107 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 HMGN4O00479 90 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NDUFC1O43677 76 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NUPR1O60356 82 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 IGHG2P01859 326 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 IGLV7-43P04211 117 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 GYPBP06028 91 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 ASAH2BP0C7U1 165 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 LINC00694P0DN24 101 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 COL8A2P25067 703 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 GCHFRP30047 84 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NPC2P61916 151 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 HBBP68871 147 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 SLC38A11Q08AI6 406 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 WFDC2Q14508 124 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 C1orf140Q5VVS0 124 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 EBLN2Q6P2I7 272 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 AAED1Q7RTV5 226 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 LINC00643Q86TS7 51 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 SBSPONQ8IVN8 264 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 RPRMLQ8N4K4 120 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 TMEM86BQ8N661 226 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 FAM57AQ8TBR7 257 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NT5CQ8TCD5 201 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 ITLN2Q8WWU7 325 aaPredicted RBP1.32□□□□□ -2.2
CBX3-208ENST00000497498 TRGV9Q99603 122 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 C20orf78Q9BR46 151 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 TMEM222Q9H0R3 208 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 C11orf1Q9H5F2 150 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NHP2Q9NX24 153 aaKnown RBP1.32□□□□□ -2.2
CBX3-208ENST00000497498 AMMECR1Q9Y4X0 333 aaPredicted RBP1.32□□□□□ -2.2
CBX3-208ENST00000497498 SERP1Q9Y6X1 66 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 CPAMD8Q8IZJ3 1885 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 DNAH10Q8IVF4 4471 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 SEC16AO15027 2179 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 PLECQ15149 4684 aaKnown RBP1.32□□□□□ -2.2
CBX3-208ENST00000497498 PLCE1Q9P212 2302 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 MUC4Q99102 2169 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 DYNC1H1Q14204 4646 aaKnown RBP1.31□□□□□ -2.2
CBX3-208ENST00000497498 DENND4CQ5VZ89 1909 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 TNRC6AQ8NDV7 1962 aaKnown RBP1.31□□□□□ -2.2
CBX3-208ENST00000497498 TRBV19A0A075B6N1 114 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 IGHV3OR15-7A0A075B7D8 119 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 TRGV5A0A0B4J1U4 118 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 MYMXA0A1B0GTQ4 84 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 A0A1W2PNN7 141 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PGPA6NDG6 321 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 H3BMM0 161 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 H3BP45 60 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 M0R1B8 84 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 HCRTO43612 131 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 NDUFB3O43676 98 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 SYNGR2O43760 224 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 IGKCP01834 107 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 HBDP02042 147 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 TRGV3P03979 118 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 COX6CP09669 75 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 MGST1P10620 155 aaKnown RBP1.31□□□□□ -2.2
CBX3-208ENST00000497498 COX6A1P12074 109 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PLNP26678 52 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PCBD1P61457 104 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 CCL8P80075 99 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PMAIP1Q13794 54 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 DIAPH2-AS1Q14236 149 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 GUSBP1Q15486 140 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 ATXN8Q156A1 80 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 C12orf74Q32Q52 190 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 CLLU1OSQ5K130 101 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 S100A7L2Q5SY68 101 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 ATP5EP2Q5VTU8 51 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 TMEM14EPQ6UXP3 125 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 ADM2Q7Z4H4 148 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 RPS19BP1Q86WX3 136 aaKnown RBP1.31□□□□□ -2.2
CBX3-208ENST00000497498 LINC00337Q8N6G1 96 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 KLF14Q8TD94 323 aaPredicted RBP1.31□□□□□ -2.2
CBX3-208ENST00000497498 UBE2WQ96B02 151 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 DPH3Q96FX2 82 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 FMC1Q96HJ9 113 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 AMELYQ99218 206 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PRSS27Q9BQR3 290 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 AICDAQ9GZX7 198 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 AGPAT4-IT1Q9H0P7 198 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 FAM60AQ9NP50 221 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 PSENENQ9NZ42 101 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 ZNF492Q9P255 531 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 R4GMQ9 66 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 V9GYV3 84 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 HEATR5AQ86XA9 2040 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 DNAH3Q8TD57 4116 aa1.31□□□□□ -2.2
CBX3-208ENST00000497498 CADP27708 2225 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms