RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 CD7P09564 240 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 CRYGAP11844 174 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 CXCL5P42830 114 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 LYZL1Q6UWQ5 148 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 Q6ZQT7 251 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 VKORC1L1Q8N0U8 176 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 MAP6D1Q9H9H5 199 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 STAB2Q8WWQ8 2551 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 TENM3Q9P273 2699 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 IGHV4OR15-8A0A075B7B6 117 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 A0A087WW49 117 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.89□□□□□ -1.63
HOXA9-206ENST00000497089 A0A0B4J2C4 111 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 OVOL1O14753 267 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 IGLV2-11P01706 119 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 CRYGDP07320 174 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 COX7CP15954 63 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 LAGE3Q14657 143 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 VMA21Q3ZAQ7 101 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 GOLT1AQ6ZVE7 132 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 COX8CQ7Z4L0 72 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 STHQ8IWL8 128 aa4.89□□□□□ -1.63
HOXA9-206ENST00000497089 ZNF256Q9Y2P7 627 aaPredicted RBP4.89□□□□□ -1.63
HOXA9-206ENST00000497089 TRACP01848 142 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 TRGV3P03979 118 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 ZNF56Q15929 161 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 ORMDL2Q53FV1 153 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 USMG5Q96IX5 58 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
HOXA9-206ENST00000497089 IGKV1D-37A0A075B6S9 117 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 ATOX1O00244 68 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 IGHV3-11P01762 117 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 SAA1P0DJI8 122 aaPredicted RBP4.87□□□□□ -1.63
HOXA9-206ENST00000497089 FXYD7P58549 80 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 KLK9Q2XQG4 91 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 POM121L12Q8N7R1 296 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 CNFNQ9BYD5 112 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 EDA2RQ9HAV5 297 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 KLK9Q9UKQ9 250 aa4.87□□□□□ -1.63
HOXA9-206ENST00000497089 IGLV1-51P01701 117 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 CFC1P0CG37 223 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 C2orf82Q6UX34 121 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 TRPT1Q86TN4 253 aaKnown RBP4.86□□□□□ -1.63
HOXA9-206ENST00000497089 TMEM167AQ8TBQ9 72 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 SMAD5-AS1Q9Y6J3 95 aa4.86□□□□□ -1.63
HOXA9-206ENST00000497089 IGLV2-18A0A075B6J9 118 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 TRBV30A0A0K0K1B3 111 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 RBAKDNA6NC62 111 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 FAM223BA6NKX1 122 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 SMKR1H3BMG3 65 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 MRPS12O15235 138 aaKnown RBP4.85□□□□□ -1.63
HOXA9-206ENST00000497089 SH2D1AO60880 128 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 COX6CP09669 75 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 PDE6HQ13956 83 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 C10orf55Q5SWW7 151 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 FAM223AQ8IWN6 122 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 SLC25A29Q8N8R3 303 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 RPL36ALQ969Q0 106 aaKnown RBP4.85□□□□□ -1.63
HOXA9-206ENST00000497089 DNAH3Q8TD57 4116 aa4.85□□□□□ -1.63
HOXA9-206ENST00000497089 TRBV19A0A075B6N1 114 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 A0A0J9YY99 117 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 NDUFC2-KCTD14E9PQ53 114 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 TRBV12-3P01733 135 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 IGHV3-33P01772 117 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 Q1RN00 199 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 PVRIGQ6DKI7 326 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 ZNF575Q86XF7 245 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 NEXN-AS1Q8NBZ9 246 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
HOXA9-206ENST00000497089 E7EUB6 86 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 PPP1R17O96001 155 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 APELAP0DMC3 54 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 RPL27AP46776 148 aaKnown RBP4.83□□□□□ -1.64
HOXA9-206ENST00000497089 CRIP1P50238 77 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 SYNJ2BPP57105 145 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 SFTA2Q6UW10 78 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 TMEM263Q8WUH6 116 aaKnown RBP4.83□□□□□ -1.64
HOXA9-206ENST00000497089 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
HOXA9-206ENST00000497089 IGLV11-55A0A075B6I3 123 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 TEX49A0A1B0GTD5 131 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 EXOC3-AS1Q8N2X6 119 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 DPH3Q96FX2 82 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 METTL26Q96S19 204 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms