RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 C1orf167Q5SNV9 1468 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 PXDNQ92626 1479 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 H3BRM9 83 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 PPYP01298 95 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 UNQ5815/PRO19632Q6UWF5 114 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 AQP10Q96PS8 301 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 MRPL36Q9P0J6 103 aaKnown RBP2.07□□□□□ -2.08
SNX13-211ENST00000496855 CNOT1A5YKK6 2376 aaKnown RBP2.07□□□□□ -2.08
SNX13-211ENST00000496855 SNRNP200O75643 2136 aaKnown RBP2.07□□□□□ -2.08
SNX13-211ENST00000496855 LAMB1P07942 1786 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 TRPM2O94759 1503 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 FAM24AA6NFZ4 105 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 TMEM106BQ9NUM4 274 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 KLK9Q9UKQ9 250 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 C22orf24Q9Y442 160 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 SIP14410 1827 aa2.07□□□□□ -2.08
SNX13-211ENST00000496855 PARP4Q9UKK3 1724 aaKnown RBP2.06□□□□□ -2.08
SNX13-211ENST00000496855 ANKRD26Q9UPS8 1709 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 FYCO1Q9BQS8 1478 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 CLTCL1P53675 1640 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 COL14A1Q05707 1796 aaKnown RBP2.06□□□□□ -2.08
SNX13-211ENST00000496855 PDE6GP18545 87 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 SNCAP37840 140 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 UBA52P62987 128 aaKnown RBP2.06□□□□□ -2.08
SNX13-211ENST00000496855 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 C4orf33Q8N1A6 199 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 ZNF625Q96I27 306 aaPredicted RBP2.06□□□□□ -2.08
SNX13-211ENST00000496855 RRBP1Q9P2E9 1410 aaKnown RBP2.06□□□□□ -2.08
SNX13-211ENST00000496855 FAM186AA6NE01 2351 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 PIK3C2BO00750 1634 aa2.06□□□□□ -2.08
SNX13-211ENST00000496855 SPG11Q96JI7 2443 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 RIF1Q5UIP0 2472 aaKnown RBP2.05□□□□□ -2.08
SNX13-211ENST00000496855 ARHGAP5Q13017 1502 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 CHD3Q12873 2000 aaKnown RBP2.05□□□□□ -2.08
SNX13-211ENST00000496855 PTPRDP23468 1912 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 IGHV3-30P01768 117 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 CCKP06307 115 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 IGHV3-30-5P0DP03 117 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 MRPL35Q9NZE8 188 aaKnown RBP2.05□□□□□ -2.08
SNX13-211ENST00000496855 DMDP11532 3685 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 ERVK-7P63135 1459 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 GBF1Q92538 1859 aa2.05□□□□□ -2.08
SNX13-211ENST00000496855 DAPK1P53355 1430 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 TRAV12-3A0A0B4J271 114 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 UBE2L5PA0A1B0GUS4 154 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 HCG22E2RYF7 251 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 UBE2L3P68036 154 aaKnown RBP2.04□□□□□ -2.08
SNX13-211ENST00000496855 COMMD6Q7Z4G1 85 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 DMAC1Q96GE9 116 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 DPY30Q9C005 99 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 ATG5Q9H1Y0 275 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 ATP7BP35670 1465 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 CCDC18Q5T9S5 1454 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 COL4A6Q14031 1691 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 SPTBN2O15020 2390 aa2.04□□□□□ -2.08
SNX13-211ENST00000496855 FREM2Q5SZK8 3169 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 TROQ12816 1431 aaPredicted RBP2.03□□□□□ -2.08
SNX13-211ENST00000496855 PLEKHH2Q8IVE3 1493 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 MED13Q9UHV7 2174 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 ARAP2Q8WZ64 1704 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 CLPSL1A2RUU4 121 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 DCDP81605 110 aaKnown RBP2.03□□□□□ -2.08
SNX13-211ENST00000496855 MPV17LQ2QL34 196 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 LINC00299Q6ZSB3 139 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 WFDC10AQ9H1F0 79 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 COL12A1Q99715 3063 aa2.03□□□□□ -2.08
SNX13-211ENST00000496855 TRIOO75962 3097 aa2.03□□□□□ -2.09
SNX13-211ENST00000496855 LTN1O94822 1766 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 DSPP15924 2871 aaKnown RBP2.02□□□□□ -2.09
SNX13-211ENST00000496855 MYO18AQ92614 2054 aaKnown RBP2.02□□□□□ -2.09
SNX13-211ENST00000496855 INE1O15225 51 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 DNAL4O96015 105 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 IL9P15248 144 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 RPL7L1Q6DKI1 246 aaKnown RBP2.02□□□□□ -2.09
SNX13-211ENST00000496855 TET1Q8NFU7 2136 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 GVINP1Q7Z2Y8 2422 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 FRYLO94915 3013 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 ITPR1Q14643 2758 aa2.02□□□□□ -2.09
SNX13-211ENST00000496855 EXPH5Q8NEV8 1989 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 M0R2N4 97 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 HCRTO43612 131 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 TSLPQ969D9 159 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 ZFHX3Q15911 3703 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 BTAF1O14981 1849 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 TNRC6BQ9UPQ9 1833 aaKnown RBP2.01□□□□□ -2.09
SNX13-211ENST00000496855 BOD1L1Q8NFC6 3051 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 INO80Q9ULG1 1556 aaPredicted RBP2.01□□□□□ -2.09
SNX13-211ENST00000496855 ABCA4P78363 2273 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 TRAV13-2A0A0B4J235 113 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 hADV29S1A0JD25 119 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 A6NIN4 97 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 IGLC1P0CG04 106 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 UBE2D1P51668 147 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 KRTAP21-3Q3LHN1 58 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms