RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 MED13LQ71F56 2210 aa0.46□□□□□ -2.34
TARDBP-210ENST00000496840 IFT172Q9UG01 1749 aa0.46□□□□□ -2.34
TARDBP-210ENST00000496840 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
TARDBP-210ENST00000496840 ARHGAP5Q13017 1502 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 hADV29S1A0JD25 119 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 TRAPPC2P0DI81 140 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 TRAPPC2BP0DI82 140 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 KRTDAPP60985 99 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 SPINK6Q6UWN8 80 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 NXT2Q9NPJ8 142 aaKnown RBP0.45□□□□□ -2.34
TARDBP-210ENST00000496840 CDC42SE2Q9NRR3 84 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 FAIMQ9NVQ4 179 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 PRO1854Q9UHT4 67 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 ARL2-SNX15V9GYD0 113 aa0.45□□□□□ -2.34
TARDBP-210ENST00000496840 SIPA1L3O60292 1781 aaPredicted RBP0.45□□□□□ -2.34
TARDBP-210ENST00000496840 DOCK1Q14185 1865 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 F5P12259 2224 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 PATJQ8NI35 1801 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 GNGT2O14610 69 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 COX6CP09669 75 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 UBE2D3P61077 147 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 UBE2D2P62837 147 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 SEC11AP67812 179 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 FAM223AQ8IWN6 122 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 ACBD7Q8N6N7 88 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 CNTLNQ9NXG0 1405 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 PRDM2Q13029 1718 aa0.44□□□□□ -2.34
TARDBP-210ENST00000496840 ZFYVE16Q7Z3T8 1539 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 A0A0D9SFI3 127 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 M0R3E3 92 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 IGLC1P0CG04 106 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 S100A3P33764 101 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 Q6JHZ5 121 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 LINC00472Q9H8W2 130 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 AP4S1Q9Y587 144 aa0.43□□□□□ -2.34
TARDBP-210ENST00000496840 UNC13BO14795 1591 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 ABCC5O15440 1437 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 M0R143 59 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 BCE1O60756 84 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 MPC2O95563 127 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 MGPP08493 103 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 UBA52P62987 128 aaKnown RBP0.42□□□□□ -2.34
TARDBP-210ENST00000496840 NCMAPQ5T1S8 102 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 KCPQ6ZWJ8 1503 aa0.42□□□□□ -2.34
TARDBP-210ENST00000496840 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 MT-ATP8P03928 68 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 CNFNQ9BYD5 112 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 PRO0255Q9UI72 69 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 SHROOM2Q13796 1616 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 SPHKAPQ2M3C7 1700 aa0.41□□□□□ -2.34
TARDBP-210ENST00000496840 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.34
TARDBP-210ENST00000496840 FAM223BA6NKX1 122 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 S100A8P05109 93 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 PMCHL2Q9BQD1 86 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 SPCS1Q9Y6A9 102 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 DOCK11Q5JSL3 2073 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 JMJD1CQ15652 2540 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 SHANK2Q9UPX8 1470 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 ERCC6L2Q5T890 1561 aa0.4□□□□□ -2.35
TARDBP-210ENST00000496840 KDM5AP29375 1690 aaKnown RBP0.4□□□□□ -2.35
TARDBP-210ENST00000496840 CC2D2AQ9P2K1 1620 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 ZNF236Q9UL36 1845 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 MYH8P13535 1937 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 A0A0G2JND7 137 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 A0A1B0GWA3 101 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 C10orf142B7Z368 130 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 LINC00032P0C843 101 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 TMEM263Q8WUH6 116 aaKnown RBP0.39□□□□□ -2.35
TARDBP-210ENST00000496840 SPRR4Q96PI1 79 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 DPY30Q9C005 99 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 TNCP24821 2201 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 KIF21AQ7Z4S6 1674 aa0.39□□□□□ -2.35
TARDBP-210ENST00000496840 HMGXB3Q12766 1538 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 EHBP1L1Q8N3D4 1523 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 DOCK2Q92608 1830 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 MYOM1P52179 1685 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 NDUFC1O43677 76 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 SAA2P0DJI9 122 aaPredicted RBP0.38□□□□□ -2.35
TARDBP-210ENST00000496840 C10orf113Q5VZT2 155 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 FDCSPQ8NFU4 85 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 VAMP8Q9BV40 100 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 CACFD1Q9UGQ2 172 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 PI4KAP42356 2102 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 LRRC37A2A6NM11 1700 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 LRP6O75581 1613 aa0.38□□□□□ -2.35
TARDBP-210ENST00000496840 MRC2Q9UBG0 1479 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 PSME4Q14997 1843 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 ATOX1O00244 68 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 Q5BKY6 102 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 COL5A1-AS1Q5SY13 56 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 PRO1933Q9H354 126 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 TP53AIP1Q9HCN2 124 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 NSD3Q9BZ95 1437 aa0.37□□□□□ -2.35
TARDBP-210ENST00000496840 ARHGEF5Q12774 1597 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 ANKRD36BQ8N2N9 1353 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 CADP27708 2225 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 FXYD6-FXYD2A0A087WZ82 144 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 TRBV6-1A0A0K0K1D8 114 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 SPINK1P00995 79 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms