RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DEFB113Q30KQ7 82 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 LY6G5BQ8NDX9 201 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 IGHV3-23P01764 117 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 NPC2P61916 151 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 VMO1Q7Z5L0 202 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 TINCRA0A1B0GVN0 87 aa6.68□□□□□ -1.34
HPS4-217ENST00000496385 PFN2P35080 140 aa6.68□□□□□ -1.34
HPS4-217ENST00000496385 WFDC11Q8NEX6 87 aa6.68□□□□□ -1.34
HPS4-217ENST00000496385 FAM110DQ8TAY7 271 aaPredicted RBP6.68□□□□□ -1.34
HPS4-217ENST00000496385 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
HPS4-217ENST00000496385 COX7A1P24310 79 aa6.68□□□□□ -1.34
HPS4-217ENST00000496385 TRAV12-2A0A075B6T6 113 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 F5H697 171 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 M0R1W7 72 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 PRIMA1Q86XR5 153 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 TEP1Q99973 2627 aaKnown RBP6.67□□□□□ -1.34
HPS4-217ENST00000496385 TLN2Q9Y4G6 2542 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 HIVEP1P15822 2718 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 J3QLI3 93 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 GNRH2O43555 120 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 DNAL4O96015 105 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 Q6ZSV7 163 aa6.67□□□□□ -1.34
HPS4-217ENST00000496385 NDUFA1O15239 70 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 BCE1O60756 84 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 M0QY20 66 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 NDPQ00604 133 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 C15orf32Q32M92 178 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 S100A7L2Q5SY68 101 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 RNF152Q8N8N0 203 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 Q96MF0 132 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
HPS4-217ENST00000496385 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 CSPG4Q6UVK1 2322 aa6.66□□□□□ -1.34
HPS4-217ENST00000496385 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
HPS4-217ENST00000496385 IGF1P05019 195 aa6.65□□□□□ -1.34
HPS4-217ENST00000496385 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.34
HPS4-217ENST00000496385 Q8N6K4 173 aa6.65□□□□□ -1.34
HPS4-217ENST00000496385 IGHV4-30-2A0A087WSY4 118 aa6.65□□□□□ -1.35
HPS4-217ENST00000496385 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.35
HPS4-217ENST00000496385 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.35
HPS4-217ENST00000496385 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.35
HPS4-217ENST00000496385 IGHV3OR16-8A0A075B7F1 116 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
HPS4-217ENST00000496385 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 IGHV3-66A0A0C4DH42 116 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 IGHG2P01859 326 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 CD28P10747 220 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 F8P00451 2351 aa6.64□□□□□ -1.35
HPS4-217ENST00000496385 IGHV3-35A0A0C4DH35 117 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 BPESC1Q9GZL8 116 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 MUC4Q99102 2169 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 TRAV12-3A0A0B4J271 114 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 KLLNB2CW77 178 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 SOCS3O14543 225 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 MTORP42345 2549 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 ODF3BA8MYP8 253 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 FHL2Q14192 279 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 HIST2H2BDQ6DRA6 164 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 C10orf105Q8TEF2 133 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 CCDC140Q96MF4 163 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 SMR3AQ99954 134 aa6.63□□□□□ -1.35
HPS4-217ENST00000496385 A0A087WWL8 130 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 RPL28P46779 137 aaKnown RBP6.62□□□□□ -1.35
HPS4-217ENST00000496385 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 PIMREGQ9BSJ6 248 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 C1orf43Q9BWL3 253 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 ARHGAP32A7KAX9 2087 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 CLEC19AQ6UXS0 136 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
HPS4-217ENST00000496385 SONP18583 2426 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 IGHV4-61A0A0C4DH41 118 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 TRAV13-2A0A0B4J235 113 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
HPS4-217ENST00000496385 TMEM86BQ8N661 226 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 ABCA2Q9BZC7 2435 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
HPS4-217ENST00000496385 MINOS1Q5TGZ0 78 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 Q8N2B8 174 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 MINOS1-NBL1R4GNA1 71 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 CR1P17927 2039 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms