RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 CDC42SE2Q9NRR3 84 aa14.77□□□□□ -0.05
ECHDC3-205ENST00000496136 ANGP03950 147 aaKnown RBP14.75□□□□□ -0.05
ECHDC3-205ENST00000496136 SNRPEP62304 92 aaKnown RBP14.75□□□□□ -0.05
ECHDC3-205ENST00000496136 TIMM17AQ99595 171 aa14.75□□□□□ -0.05
ECHDC3-205ENST00000496136 ZNF664Q8N3J9 261 aa14.75□□□□□ -0.05
ECHDC3-205ENST00000496136 KLK12Q9UKR0 248 aa14.75□□□□□ -0.05
ECHDC3-205ENST00000496136 VPS13DQ5THJ4 4388 aa14.74□□□□□ -0.05
ECHDC3-205ENST00000496136 IGLV4-3A0A075B6K6 122 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 C5orf52A6NGY3 159 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 LEPROTL1O95214 131 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 MRPS36P82909 103 aaKnown RBP14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 TMEM141Q96I45 108 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 K7EP13 123 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 FABP4P15090 132 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 RNASE13Q5GAN3 156 aaKnown RBP14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 Q6ZUT4 128 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 LINC00269Q8N2A0 174 aa14.73□□□□□ -0.05
ECHDC3-205ENST00000496136 TRAV9-2A0A087WT02 112 aa14.72□□□□□ -0.05
ECHDC3-205ENST00000496136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.72□□□□□ -0.05
ECHDC3-205ENST00000496136 NPSP0C0P6 89 aa14.72□□□□□ -0.05
ECHDC3-205ENST00000496136 LINC00173Q6ZV60 143 aa14.72□□□□□ -0.05
ECHDC3-205ENST00000496136 HIST3H2BBQ8N257 126 aa14.72□□□□□ -0.05
ECHDC3-205ENST00000496136 DNAH1Q9P2D7 4330 aa14.71□□□□□ -0.05
ECHDC3-205ENST00000496136 ATP5LO75964 103 aa14.71□□□□□ -0.05
ECHDC3-205ENST00000496136 KRTAP1-5Q9BYS1 174 aa14.71□□□□□ -0.05
ECHDC3-205ENST00000496136 C10orf126Q8N4M7 172 aa14.7□□□□□ -0.06
ECHDC3-205ENST00000496136 NBDYA0A0U1RRE5 68 aa14.7□□□□□ -0.06
ECHDC3-205ENST00000496136 PRR34Q9NV39 138 aa14.7□□□□□ -0.06
ECHDC3-205ENST00000496136 IBA57-AS1B1ANH7 110 aa14.69□□□□□ -0.06
ECHDC3-205ENST00000496136 REG3AQ06141 175 aa14.69□□□□□ -0.06
ECHDC3-205ENST00000496136 ENHOQ6UWT2 76 aa14.69□□□□□ -0.06
ECHDC3-205ENST00000496136 IFI27L1Q96BM0 104 aa14.69□□□□□ -0.06
ECHDC3-205ENST00000496136 VCX2Q9H322 139 aa14.69□□□□□ -0.06
ECHDC3-205ENST00000496136 PAPPA-AS1Q5QFB9 102 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 ZC2HC1BQ5TFG8 222 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 CLPSL2Q6UWE3 100 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 Q6ZN92 141 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 PACRGQ96M98 296 aaPredicted RBP14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 AMELXQ99217 191 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 HSPB8Q9UJY1 196 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 BAALCQ8WXS3 180 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 UBE2WQ96B02 151 aa14.68□□□□□ -0.06
ECHDC3-205ENST00000496136 IGKV3OR2-268A0A0C4DH90 116 aa14.67□□□□□ -0.06
ECHDC3-205ENST00000496136 S100A2P29034 98 aa14.67□□□□□ -0.06
ECHDC3-205ENST00000496136 TEX43Q6ZNM6 134 aa14.67□□□□□ -0.06
ECHDC3-205ENST00000496136 KMT2AQ03164 3969 aa14.67□□□□□ -0.06
ECHDC3-205ENST00000496136 LCE6AA0A183 80 aa14.66□□□□□ -0.06
ECHDC3-205ENST00000496136 M0R2N4 97 aa14.66□□□□□ -0.06
ECHDC3-205ENST00000496136 TTC32Q5I0X7 151 aa14.66□□□□□ -0.06
ECHDC3-205ENST00000496136 IFITM10A6NMD0 228 aa14.65□□□□□ -0.06
ECHDC3-205ENST00000496136 ALMS1Q8TCU4 4167 aa14.65□□□□□ -0.06
ECHDC3-205ENST00000496136 HIST1H2BLQ99880 126 aa14.65□□□□□ -0.06
ECHDC3-205ENST00000496136 CRPP02741 224 aa14.65□□□□□ -0.06
ECHDC3-205ENST00000496136 PRSS1P07477 247 aa14.65□□□□□ -0.06
ECHDC3-205ENST00000496136 Q6ZR54 194 aa14.64□□□□□ -0.07
ECHDC3-205ENST00000496136 CST9LQ9H4G1 147 aa14.64□□□□□ -0.07
ECHDC3-205ENST00000496136 TRAV13-1A0A0B4J241 112 aa14.63□□□□□ -0.07
ECHDC3-205ENST00000496136 LINC00959A0A1B0GUT2 108 aa14.63□□□□□ -0.07
ECHDC3-205ENST00000496136 PMVKQ15126 192 aa14.63□□□□□ -0.07
ECHDC3-205ENST00000496136 KMT2CQ8NEZ4 4911 aaKnown RBP14.63□□□□□ -0.07
ECHDC3-205ENST00000496136 TRAV8-3A0A0A6YYJ7 113 aa14.62□□□□□ -0.07
ECHDC3-205ENST00000496136 MIAQ16674 131 aa14.62□□□□□ -0.07
ECHDC3-205ENST00000496136 PRSS29PA6NIE9 313 aa14.62□□□□□ -0.07
ECHDC3-205ENST00000496136 Q9HAA7 133 aa14.62□□□□□ -0.07
ECHDC3-205ENST00000496136 C2orf88Q9BSF0 95 aa14.61□□□□□ -0.07
ECHDC3-205ENST00000496136 IGLV10-54A0A075B6I4 117 aa14.6□□□□□ -0.07
ECHDC3-205ENST00000496136 MAP1LC3CQ9BXW4 147 aa14.6□□□□□ -0.07
ECHDC3-205ENST00000496136 TRAV8-4A0A0B4J246 113 aa14.59□□□□□ -0.07
ECHDC3-205ENST00000496136 H0Y8G0 127 aa14.59□□□□□ -0.07
ECHDC3-205ENST00000496136 UBE2D1P51668 147 aa14.59□□□□□ -0.07
ECHDC3-205ENST00000496136 SS18Q15532 418 aa14.59□□□□□ -0.07
ECHDC3-205ENST00000496136 TRAV12-1A0A0B4J245 112 aa14.58□□□□□ -0.08
ECHDC3-205ENST00000496136 CCL25O15444 150 aa14.57□□□□□ -0.08
ECHDC3-205ENST00000496136 C3orf79P0CE67 100 aa14.57□□□□□ -0.08
ECHDC3-205ENST00000496136 SYS1-DBNDD2H3BUS1 97 aa14.57□□□□□ -0.08
ECHDC3-205ENST00000496136 LINC00242Q5T6M2 205 aa14.57□□□□□ -0.08
ECHDC3-205ENST00000496136 KRTDAPP60985 99 aa14.56□□□□□ -0.08
ECHDC3-205ENST00000496136 CHCHD10Q8WYQ3 142 aaPredicted RBP14.56□□□□□ -0.08
ECHDC3-205ENST00000496136 C1orf43Q9BWL3 253 aa14.56□□□□□ -0.08
ECHDC3-205ENST00000496136 IGKV2D-24A0A075B6R9 120 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 A0A0J9YXV3 536 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 FAM19A3Q7Z5A8 133 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 SPATA12Q7Z6I5 190 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 HYDINQ4G0P3 5121 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 XCL1P47992 114 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 ODF1Q14990 250 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 KRTAP26-1Q6PEX3 210 aa14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 CHTOPQ9Y3Y2 248 aaKnown RBP14.55□□□□□ -0.08
ECHDC3-205ENST00000496136 COX6A2Q02221 97 aa14.54□□□□□ -0.08
ECHDC3-205ENST00000496136 RMI2Q96E14 147 aa14.53□□□□□ -0.08
ECHDC3-205ENST00000496136 MRPL35Q9NZE8 188 aaKnown RBP14.53□□□□□ -0.08
ECHDC3-205ENST00000496136 IGLV4-69A0A075B6H9 119 aa14.52□□□□□ -0.08
ECHDC3-205ENST00000496136 PET117Q6UWS5 81 aa14.52□□□□□ -0.08
ECHDC3-205ENST00000496136 NFE4Q86UQ8 179 aa14.52□□□□□ -0.08
ECHDC3-205ENST00000496136 C6orf223Q8N319 242 aa14.52□□□□□ -0.08
ECHDC3-205ENST00000496136 DNAH6Q9C0G6 4158 aa14.52□□□□□ -0.08
ECHDC3-205ENST00000496136 CD164L2Q6UWJ8 174 aa14.52□□□□□ -0.09
ECHDC3-205ENST00000496136 OR10D4PQ8NGN7 298 aa14.52□□□□□ -0.09
ECHDC3-205ENST00000496136 TINCRA0A1B0GVN0 87 aa14.51□□□□□ -0.09
ECHDC3-205ENST00000496136 GAGE12HA6NDE8 117 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms