RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TMEM243Q9BU79 118 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 C11orf68Q9H3H3 251 aaKnown RBP11.44□□□□□ -0.58
HLA-A-208ENST00000496081 TENM3Q9P273 2699 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 A0A0J9YY99 117 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 NMUP48645 174 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 MRPS36P82909 103 aaKnown RBP11.43□□□□□ -0.58
HLA-A-208ENST00000496081 DGAT2L7PQ6IED9 249 aa11.43□□□□□ -0.58
HLA-A-208ENST00000496081 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
HLA-A-208ENST00000496081 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
HLA-A-208ENST00000496081 HTN3P15516 51 aa11.42□□□□□ -0.58
HLA-A-208ENST00000496081 TMEM97Q5BJF2 176 aa11.42□□□□□ -0.58
HLA-A-208ENST00000496081 DEFB121Q5J5C9 76 aa11.42□□□□□ -0.58
HLA-A-208ENST00000496081 PCP2Q8IVA1 136 aa11.42□□□□□ -0.58
HLA-A-208ENST00000496081 CSDC2Q9Y534 153 aaKnown RBP11.42□□□□□ -0.58
HLA-A-208ENST00000496081 A0A0J9YXV3 536 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 M0R143 59 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 BOD1L2Q8IYS8 172 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 H7C423 109 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 UBE2L6O14933 153 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
HLA-A-208ENST00000496081 MRPS16Q9Y3D3 137 aaKnown RBP11.41□□□□□ -0.58
HLA-A-208ENST00000496081 A0A096LPF7 62 aa11.4□□□□□ -0.58
HLA-A-208ENST00000496081 A0A0J9YWU9 116 aa11.4□□□□□ -0.58
HLA-A-208ENST00000496081 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 AMMECR1LQ6DCA0 310 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 MRAPQ8TCY5 172 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 DLEU1O43261 78 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
HLA-A-208ENST00000496081 E9PLD3 99 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 GAGE6Q13070 117 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 C2orf91Q6ZV80 131 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 SNHG12Q9BXW3 62 aa11.38□□□□□ -0.59
HLA-A-208ENST00000496081 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
HLA-A-208ENST00000496081 UBE2D1P51668 147 aa11.37□□□□□ -0.59
HLA-A-208ENST00000496081 Q6ZTC4 211 aa11.37□□□□□ -0.59
HLA-A-208ENST00000496081 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
HLA-A-208ENST00000496081 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
HLA-A-208ENST00000496081 EREGO14944 169 aa11.36□□□□□ -0.59
HLA-A-208ENST00000496081 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
HLA-A-208ENST00000496081 MRPL23Q16540 153 aaKnown RBP11.36□□□□□ -0.59
HLA-A-208ENST00000496081 TINCRA0A1B0GVN0 87 aa11.36□□□□□ -0.59
HLA-A-208ENST00000496081 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
HLA-A-208ENST00000496081 TMEM223A0PJW6 202 aa11.35□□□□□ -0.59
HLA-A-208ENST00000496081 HERVK_113P61574 105 aa11.35□□□□□ -0.59
HLA-A-208ENST00000496081 ICOSQ9Y6W8 199 aa11.35□□□□□ -0.59
HLA-A-208ENST00000496081 NANOS2P60321 138 aaKnown RBP11.34□□□□□ -0.59
HLA-A-208ENST00000496081 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
HLA-A-208ENST00000496081 IGLV4-60A0A075B6I1 120 aa11.33□□□□□ -0.59
HLA-A-208ENST00000496081 SIVA1O15304 175 aa11.33□□□□□ -0.59
HLA-A-208ENST00000496081 SH2D6Q7Z4S9 175 aa11.32□□□□□ -0.6
HLA-A-208ENST00000496081 FAM19A3Q7Z5A8 133 aa11.32□□□□□ -0.6
HLA-A-208ENST00000496081 TRAV13-1A0A0B4J241 112 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 H3BNG1 76 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 TIRAPP58753 221 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 GEMIN7Q9H840 131 aaKnown RBP11.31□□□□□ -0.6
HLA-A-208ENST00000496081 HINT1P49773 126 aaPredicted RBP11.31□□□□□ -0.6
HLA-A-208ENST00000496081 COX6A2Q02221 97 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 BATFQ16520 125 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
HLA-A-208ENST00000496081 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
HLA-A-208ENST00000496081 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
HLA-A-208ENST00000496081 RBX1P62877 108 aa11.29□□□□□ -0.6
HLA-A-208ENST00000496081 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
HLA-A-208ENST00000496081 DEFB131BA0A096LNP1 70 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 LEPROTO15243 131 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 HERVK_113P63121 156 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 SEC11AP67812 179 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 HIGD1BQ9P298 99 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 J3QQQ9 107 aa11.28□□□□□ -0.6
HLA-A-208ENST00000496081 HUWE1Q7Z6Z7 4374 aaKnown RBP11.27□□□□□ -0.6
HLA-A-208ENST00000496081 TRAV8-3A0A0A6YYJ7 113 aa11.27□□□□□ -0.61
HLA-A-208ENST00000496081 LELP1Q5T871 98 aa11.27□□□□□ -0.61
HLA-A-208ENST00000496081 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
HLA-A-208ENST00000496081 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 A0A1B0GV90 55 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
HLA-A-208ENST00000496081 H3BRM9 83 aa11.25□□□□□ -0.61
HLA-A-208ENST00000496081 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
HLA-A-208ENST00000496081 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
HLA-A-208ENST00000496081 HSD52Q0P140 79 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms