RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PRSS3P2Q8NHM4 247 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 RASL10AQ92737 203 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 C7orf71A4D174 169 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 C17orf112F2Z3M2 114 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 SERF1AO75920 110 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 MT-ND6P03923 174 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 PRSS1P07477 247 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 OR5AL1P0C617 328 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 FGF8P55075 233 aaPredicted RBP6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 BAGE3Q86Y29 109 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 BAGE2Q86Y30 109 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 WDR61Q9GZS3 305 aaKnown RBP6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
SMARCAL1-213ENST00000496037 IGKV2D-24A0A075B6R9 120 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 GGTLC3B5MD39 225 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 H3BRN7 92 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 NUPR1O60356 82 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 TSHBP01222 138 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 SLC25A5P05141 298 aaKnown RBP6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 PRSS2P07478 247 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 NBEAP1P0C6P0 100 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 KRTDAPP60985 99 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 MUC21Q5SSG8 566 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 C9orf85Q96MD7 179 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 SLC50A1Q9BRV3 221 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 KCNIP2Q9NS61 270 aa6.12□□□□□ -1.43
SMARCAL1-213ENST00000496037 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 SLPIP03973 132 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 GPX1P07203 203 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 GNB1LQ9BYB4 327 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 PSENENQ9NZ42 101 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 IL36BQ9NZH7 164 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 HIGD1AQ9Y241 93 aa6.11□□□□□ -1.43
SMARCAL1-213ENST00000496037 PANO1I0J062 215 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 SYNGR2O43760 224 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 CT45A10P0DMU9 189 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 RPL18AQ02543 176 aaKnown RBP6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 S100A7AQ86SG5 101 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 NIT1Q86X76 327 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 OR10P1Q8NGE3 313 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 ZC2HC1AQ96GY0 325 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 SFRP2Q96HF1 295 aa6.1□□□□□ -1.43
SMARCAL1-213ENST00000496037 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 E9PLD3 99 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 HINT1P49773 126 aaPredicted RBP6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 SLC38A11Q08AI6 406 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 FAM162BQ5T6X4 162 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 DAZ4Q86SG3 579 aaKnown RBP6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 OR10G9Q8NGN4 311 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 OR10G7Q8NGN6 311 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 C7orf33Q8WU49 177 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 C11orf52Q96A22 123 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 BORCS7Q96B45 105 aa6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 ZNF331Q9NQX6 463 aaPredicted RBP6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 DAZ3Q9NR90 486 aaKnown RBP6.09□□□□□ -1.43
SMARCAL1-213ENST00000496037 GRIFINA4D1Z8 144 aa6.08□□□□□ -1.44
SMARCAL1-213ENST00000496037 PMS2P5A8MQ11 134 aa6.08□□□□□ -1.44
SMARCAL1-213ENST00000496037 RNASE4P34096 147 aaKnown RBP6.08□□□□□ -1.44
SMARCAL1-213ENST00000496037 KIF25-AS1Q9Y6Z4 181 aa6.08□□□□□ -1.44
SMARCAL1-213ENST00000496037 IGHV1OR15-1A0A075B7D0 117 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 TRAV4A0A0B4J268 109 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 UBE2L5PA0A1B0GUS4 154 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 KLLNB2CW77 178 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 HLA-DQA1P01909 254 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 LINC00869P0C866 280 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 HIST1H1EP10412 219 aaKnown RBP6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 TMEM14EPQ6UXP3 125 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 ST20Q9HBF5 79 aa6.07□□□□□ -1.44
SMARCAL1-213ENST00000496037 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 H3BP45 60 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 OR10J4P0C629 311 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 C3orf79P0CE67 100 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 GTF2H5Q6ZYL4 71 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 MRAP2Q96G30 205 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 PMCHL2Q9BQD1 86 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 PRADC1Q9BSG0 188 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
SMARCAL1-213ENST00000496037 SLC17A3O00476 420 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 IAPPP10997 89 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 RASL11AQ6T310 242 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 C9orf163Q8N9P6 203 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 ARL2-SNX15V9GYD0 113 aa6.05□□□□□ -1.44
SMARCAL1-213ENST00000496037 IGHV3-16A0A0C4DH30 117 aa6.04□□□□□ -1.44
SMARCAL1-213ENST00000496037 OR7C2O60412 319 aa6.04□□□□□ -1.44
SMARCAL1-213ENST00000496037 SMIM17P0DL12 118 aa6.04□□□□□ -1.44
SMARCAL1-213ENST00000496037 UBE2G1P62253 170 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms