RNA–Protein interactions for RNA: ENST00000495615.5

CBWD5-231, Transcript of COBW domain containing 5, human

TSL 3

Gene CBWD5, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-231	ENST00000495615	TJP1	Q07157	1748 aa		-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	MARF1	Q9Y4F3	1742 aa	Known RBP	-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	MKI67	P46013	3256 aa	Known RBP	-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	DNAH9	Q9NYC9	4486 aa		-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	VPS13C	Q709C8	3753 aa		-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	DNAH12	Q6ZR08	3092 aa		-0.07	□□□□□ -2.42
CBWD5-231	ENST00000495615	WNK3	Q9BYP7	1800 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	SZT2	Q5T011	3432 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	PAPPA	Q13219	1627 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	ALK	Q9UM73	1620 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	VPS13D	Q5THJ4	4388 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	KDM3B	Q7LBC6	1761 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	RGPD4	Q7Z3J3	1758 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	MYH13	Q9UKX3	1938 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	SPEN	Q96T58	3664 aa	Known RBP	-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615		H0YAA0	97 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615		M0R2P5	195 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	ACYP2	P14621	99 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	NPC2	P61916	151 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	NCS1	P62166	190 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	SPCS2	Q15005	226 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	KRTAP6-2	Q3LI66	62 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	COX7B2	Q8TF08	81 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	DPH3P1	Q9H4G8	78 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	MRPL40	Q9NQ50	206 aa	Known RBP	-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	LSM2	Q9Y333	95 aa	Known RBP	-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	SMG6	Q86US8	1419 aa	Known RBP	-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	FMN2	Q9NZ56	1722 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	SPEG	Q15772	3267 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	DNAH14	Q0VDD8	3507 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	ASXL1	Q8IXJ9	1541 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	QRICH2	Q9H0J4	1663 aa		-0.08	□□□□□ -2.42
CBWD5-231	ENST00000495615	DNAH10	Q8IVF4	4471 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	CEP350	Q5VT06	3117 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	CFAP47	Q6ZTR5	3102 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	SIPA1L3	O60292	1781 aa	Predicted RBP	-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	DNAH8	Q96JB1	4490 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	NRAP	Q86VF7	1730 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615		A0A087WTM6	91 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	TRAV12-3	A0A0B4J271	114 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	LOC730098	B7Z3J9	87 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	NBEAP1	P0C6P0	100 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	GCHFR	P30047	84 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	KLK9	Q2XQG4	91 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	DEFB121	Q5J5C9	76 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615		Q6ZRX8	168 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	MMGT1	Q8N4V1	131 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	AIF1L	Q9BQI0	150 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	TTTY10	Q9BZA0	68 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	SCP2D1	Q9UJQ7	156 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	BTAF1	O14981	1849 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	SBF2	Q86WG5	1849 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	CDH23	Q9H251	3354 aa		-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	RANBP2	P49792	3224 aa	Known RBP	-0.09	□□□□□ -2.42
CBWD5-231	ENST00000495615	CSMD2	Q7Z408	3487 aa		-0.1	□□□□□ -2.42
CBWD5-231	ENST00000495615	ARAP2	Q8WZ64	1704 aa		-0.1	□□□□□ -2.42
CBWD5-231	ENST00000495615	ANK3	Q12955	4377 aa	Known RBP	-0.1	□□□□□ -2.42
CBWD5-231	ENST00000495615	SMARCA2	P51531	1590 aa		-0.1	□□□□□ -2.42
CBWD5-231	ENST00000495615	DOCK2	Q92608	1830 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	ZNF142	P52746	1687 aa	Predicted RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	ZNF831	Q5JPB2	1677 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	RIMS1	Q86UR5	1692 aa	Known RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	MYH7	P12883	1935 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	MYH6	P13533	1939 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	MYH4	Q9Y623	1939 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	TMEM14DP	A8MWL7	114 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	DEFB4A	O15263	64 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	PIN1P1	O15428	100 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	CFD	P00746	253 aa	Predicted RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	MT1G	P13640	62 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	INSL4	Q14641	139 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	LINC01545	Q5VT33	79 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	RPL7L1	Q6DKI1	246 aa	Known RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	AGPAT4-IT1	Q9H0P7	198 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	NDUFA12	Q9UI09	145 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	SCN11A	Q9UI33	1791 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	PDCD11	Q14690	1871 aa	Known RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	POLR1A	O95602	1720 aa	Predicted RBP	-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	C4A	P0C0L4	1744 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	C4B	P0C0L5	1744 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	NRXN2	Q9P2S2	1712 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	CRYBG1	Q9Y4K1	1723 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	PTPRM	P28827	1452 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	PATJ	Q8NI35	1801 aa		-0.1	□□□□□ -2.43
CBWD5-231	ENST00000495615	VCAN	P13611	3396 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	PPRC1	Q5VV67	1664 aa	Known RBP	-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	MUC22	E2RYF6	1773 aa	Predicted RBP	-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	BRCA2	P51587	3418 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	VPS13A	Q96RL7	3174 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	WDFY3	Q8IZQ1	3526 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	SLIT1	O75093	1534 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	TRBV20-1	A0A075B6N2	111 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	TRGV1	A0A0A0MS02	117 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	LCE6A	A0A183	80 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	FAM236A	A0A1B0GUQ0	79 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	FAM236B	A0A1B0GV22	79 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615		A6NIN4	97 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	C10orf142	B7Z368	130 aa		-0.11	□□□□□ -2.43
CBWD5-231	ENST00000495615	SPANXN1	Q5VSR9	72 aa		-0.11	□□□□□ -2.43

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms