RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 CIRBP-AS1Q8TBR5 109 aa11.94□□□□□ -0.5
SNX8-209ENST00000494722 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
SNX8-209ENST00000494722 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
SNX8-209ENST00000494722 D6R8Y8 96 aa11.93□□□□□ -0.5
SNX8-209ENST00000494722 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
SNX8-209ENST00000494722 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
SNX8-209ENST00000494722 LINC00269Q8N2A0 174 aa11.93□□□□□ -0.5
SNX8-209ENST00000494722 ALKBH7Q9BT30 221 aaPredicted RBP11.93□□□□□ -0.5
SNX8-209ENST00000494722 TRAV26-2A0A0B4J265 109 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 PPBPP02775 128 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 CKS2P33552 79 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BDP58876 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 RAB5BP61020 215 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BCP62807 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST2H2BEQ16778 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BHQ93079 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BNQ99877 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 HIST1H2BMQ99879 126 aa11.92□□□□□ -0.5
SNX8-209ENST00000494722 NCR2O95944 276 aa11.91□□□□□ -0.5
SNX8-209ENST00000494722 TRAV8-4A0A0B4J246 113 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 PRSS1P07477 247 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 REG3AQ06141 175 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
SNX8-209ENST00000494722 NRACQ8N912 160 aa11.89□□□□□ -0.51
SNX8-209ENST00000494722 C9orf163Q8N9P6 203 aa11.89□□□□□ -0.51
SNX8-209ENST00000494722 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
SNX8-209ENST00000494722 NPYP01303 97 aa11.88□□□□□ -0.51
SNX8-209ENST00000494722 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
SNX8-209ENST00000494722 TMA7Q9Y2S6 64 aaKnown RBP11.88□□□□□ -0.51
SNX8-209ENST00000494722 UBE2L6O14933 153 aa11.87□□□□□ -0.51
SNX8-209ENST00000494722 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
SNX8-209ENST00000494722 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
SNX8-209ENST00000494722 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
SNX8-209ENST00000494722 PPP1R17O96001 155 aa11.86□□□□□ -0.51
SNX8-209ENST00000494722 COTL1Q14019 142 aa11.86□□□□□ -0.51
SNX8-209ENST00000494722 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
SNX8-209ENST00000494722 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
SNX8-209ENST00000494722 IGLV10-54A0A075B6I4 117 aa11.84□□□□□ -0.51
SNX8-209ENST00000494722 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
SNX8-209ENST00000494722 OXTP01178 125 aa11.84□□□□□ -0.51
SNX8-209ENST00000494722 AMTP48728 403 aa11.84□□□□□ -0.51
SNX8-209ENST00000494722 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
SNX8-209ENST00000494722 PRSS47A8MTI9 375 aa11.83□□□□□ -0.52
SNX8-209ENST00000494722 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
SNX8-209ENST00000494722 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.52
SNX8-209ENST00000494722 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
SNX8-209ENST00000494722 MAP1LC3AQ9H492 121 aa11.83□□□□□ -0.52
SNX8-209ENST00000494722 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
SNX8-209ENST00000494722 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
SNX8-209ENST00000494722 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
SNX8-209ENST00000494722 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
SNX8-209ENST00000494722 NDUFA6P56556 154 aa11.82□□□□□ -0.52
SNX8-209ENST00000494722 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
SNX8-209ENST00000494722 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
SNX8-209ENST00000494722 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
SNX8-209ENST00000494722 ST20Q9HBF5 79 aa11.81□□□□□ -0.52
SNX8-209ENST00000494722 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
SNX8-209ENST00000494722 LOC389332A0A1B0GUA5 103 aa11.8□□□□□ -0.52
SNX8-209ENST00000494722 LINC00310P59036 64 aa11.8□□□□□ -0.52
SNX8-209ENST00000494722 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
SNX8-209ENST00000494722 URB1-AS1Q96HZ7 61 aa11.8□□□□□ -0.52
SNX8-209ENST00000494722 FAT3Q8TDW7 4589 aa11.79□□□□□ -0.52
SNX8-209ENST00000494722 S100A6P06703 90 aa11.79□□□□□ -0.52
SNX8-209ENST00000494722 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
SNX8-209ENST00000494722 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
SNX8-209ENST00000494722 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
SNX8-209ENST00000494722 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
SNX8-209ENST00000494722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.79□□□□□ -0.52
SNX8-209ENST00000494722 PKHD1L1Q86WI1 4243 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 H7C423 109 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 SERF1AO75920 110 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 PMCHP20382 165 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 Q8N8P6 123 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 PRSS3P2Q8NHM4 247 aa11.78□□□□□ -0.52
SNX8-209ENST00000494722 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
SNX8-209ENST00000494722 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.53
SNX8-209ENST00000494722 LINC01546A6NGU7 62 aa11.77□□□□□ -0.53
SNX8-209ENST00000494722 CIRBPQ14011 172 aaKnown RBP11.77□□□□□ -0.53
SNX8-209ENST00000494722 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
SNX8-209ENST00000494722 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
SNX8-209ENST00000494722 VCYO14598 125 aa11.76□□□□□ -0.53
SNX8-209ENST00000494722 NUPR1O60356 82 aa11.76□□□□□ -0.53
SNX8-209ENST00000494722 LINC00614P0C842 121 aa11.76□□□□□ -0.53
SNX8-209ENST00000494722 ESDP10768 282 aa11.76□□□□□ -0.53
SNX8-209ENST00000494722 RNASEKQ6P5S7 137 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms