RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 COL5A3P25940 1745 aaPredicted RBP1.21□□□□□ -2.22
PTPN12-212ENST00000494248 ITSN1Q15811 1721 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 MYO10Q9HD67 2058 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 COL4A5P29400 1685 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 CFAP43Q8NDM7 1665 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 ITSN2Q9NZM3 1697 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 CD163L1Q9NR16 1453 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 SNRPGP15A8MWD9 76 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 JMJD7-PLA2G4BH0Y9G9 81 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 LEPROTL1O95214 131 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 PPYP01298 95 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV1-17P01599 117 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 CCL3L1P16619 93 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 FAM74A4Q5TZK3 123 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 DEFB132Q7Z7B7 95 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 COX7B2Q8TF08 81 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 HILPDAQ9Y5L2 63 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 TRPM6Q9BX84 2022 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 MALRD1Q5VYJ5 2156 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 GTF3C1Q12789 2109 aa1.21□□□□□ -2.22
PTPN12-212ENST00000494248 XRN1Q8IZH2 1706 aaKnown RBP1.2□□□□□ -2.22
PTPN12-212ENST00000494248 LRRC7Q96NW7 1537 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 BTAF1O14981 1849 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 MAP2P11137 1827 aaKnown RBP1.2□□□□□ -2.22
PTPN12-212ENST00000494248 AFDNP55196 1824 aaKnown RBP1.2□□□□□ -2.22
PTPN12-212ENST00000494248 DOCK2Q92608 1830 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 MRC1P22897 1456 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 EML5Q05BV3 1969 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV2D-24A0A075B6R9 120 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 A0A0G2JQZ4 141 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 D6R8Y8 96 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 F8VRH5 84 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 IGLV3-1P01715 115 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 TPRXLQ17RH7 258 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 BAGE3Q86Y29 109 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 BAGE2Q86Y30 109 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 ZNF563Q8TA94 476 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 PPP1R1CQ8WVI7 109 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 PROK2Q9HC23 129 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 R4GMQ9 66 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 ARHGEF5Q12774 1597 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 CDC42BPGQ6DT37 1551 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 UGGT1Q9NYU2 1555 aa1.2□□□□□ -2.22
PTPN12-212ENST00000494248 COL11A1P12107 1806 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV3D-7A0A0C4DH55 119 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV3OR2-268A0A0C4DH90 116 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 TRBV6-5A0A0K0K1A5 114 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 A0A1W2PNN7 141 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 ADGRB2O60241 1585 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 DNAL4O96015 105 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 SPINT3P49223 89 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 CCL18P55774 89 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 ATXN8Q156A1 80 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 C10orf55Q5SWW7 151 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 SPACA4Q8TDM5 124 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 GNG13Q9P2W3 67 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 KLK9Q9UKQ9 250 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 CEP170BQ9Y4F5 1589 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-212ENST00000494248 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 ARHGAP21Q5T5U3 1957 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 KIAA1549Q9HCM3 1950 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 MROH2AA6NES4 1674 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 A0A1B0GUL6 1792 aa1.19□□□□□ -2.22
PTPN12-212ENST00000494248 USP32Q8NFA0 1604 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 TRPM7Q96QT4 1865 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 DIP2AQ14689 1571 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
PTPN12-212ENST00000494248 FXYD6-FXYD2A0A087WZ82 144 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 TRBV7-4A0A0J9YYF1 115 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 H3BVH4 76 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 UQCR11O14957 56 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
PTPN12-212ENST00000494248 RNASE3P12724 160 aaKnown RBP1.18□□□□□ -2.22
PTPN12-212ENST00000494248 HCP5Q6MZN7 132 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 FXYD6Q9H0Q3 95 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 WFDC10AQ9H1F0 79 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 LINC00846Q9NV44 126 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 V9GYV3 84 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 ALS2Q96Q42 1657 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 MYO9BQ13459 2157 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 ATP7BP35670 1465 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 NRXN2Q9P2S2 1712 aa1.18□□□□□ -2.22
PTPN12-212ENST00000494248 MUC4Q99102 2169 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 CROCC2H7BZ55 1655 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 PLCH1Q4KWH8 1693 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 CTTNBP2Q8WZ74 1663 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 SCN3AQ9NY46 2000 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV2-28A0A075B6P5 120 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 NBDYA0A0U1RRE5 68 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 PCNX2A6NKB5 2137 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 M0R135 149 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 IGKV2D-28P01615 120 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 IGLV6-57P01721 117 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 MGPP08493 103 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 LINC00315P59091 139 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 RPL37AP61513 92 aaKnown RBP1.17□□□□□ -2.22
PTPN12-212ENST00000494248 FAM103A1Q9BTL3 118 aaKnown RBP1.17□□□□□ -2.22
PTPN12-212ENST00000494248 TTTY12Q9BZ98 90 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms