RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 K7EP13 123 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 LEPROTO15243 131 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 DEFB130BP0DP73 79 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 DEFB130AP0DP74 79 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 GCSHP23434 173 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 UBE2D1P51668 147 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 Q8NAQ8 132 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 MDFIQ99750 246 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 TMEM243Q9BU79 118 aa7.5□□□□□ -1.21
CLCN6-208ENST00000494028 VWFP04275 2813 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 A6NDN8 102 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 J3QQQ9 107 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 CEND1Q8N111 149 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 OR5A1Q8NGJ0 315 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
CLCN6-208ENST00000494028 CSDC2Q9Y534 153 aaKnown RBP7.49□□□□□ -1.21
CLCN6-208ENST00000494028 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
CLCN6-208ENST00000494028 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
CLCN6-208ENST00000494028 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
CLCN6-208ENST00000494028 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
CLCN6-208ENST00000494028 CELA1Q9UNI1 258 aa7.48□□□□□ -1.21
CLCN6-208ENST00000494028 A0A0J9YY99 117 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 H3BRM9 83 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 K7ERJ3 54 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 MIFP14174 115 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 FAM19A3Q7Z5A8 133 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 RNF183Q96D59 192 aa7.47□□□□□ -1.21
CLCN6-208ENST00000494028 H7C423 109 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 DEFB4AO15263 64 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 TIRAPP58753 221 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 SMAGPQ0VAQ4 97 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 DGAT2L7PQ6IED9 249 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 C3orf56Q8N813 242 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 HIST1H4GQ99525 98 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 SPANXB1Q9NS25 103 aaPredicted RBP7.46□□□□□ -1.22
CLCN6-208ENST00000494028 DNHD1Q96M86 4753 aa7.46□□□□□ -1.22
CLCN6-208ENST00000494028 ANK2Q01484 3957 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 IGHV1-58A0A0C4DH39 117 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 UBE2L6O14933 153 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 GYPEP15421 78 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 KRTAP21-3Q3LHN1 58 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 C10orf126Q8N4M7 172 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 NHP2Q9NX24 153 aaKnown RBP7.45□□□□□ -1.22
CLCN6-208ENST00000494028 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
CLCN6-208ENST00000494028 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 C9orf118A6NHY6 69 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 A8MZ25 164 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 DAD1P61803 113 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 GAGE6Q13070 117 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 AMMECR1LQ6DCA0 310 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 VSIG2Q96IQ7 327 aa7.44□□□□□ -1.22
CLCN6-208ENST00000494028 GEMIN7Q9H840 131 aaKnown RBP7.44□□□□□ -1.22
CLCN6-208ENST00000494028 PTTG1IPP53801 180 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 HERVK_113P63121 156 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 COX6A2Q02221 97 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 RAB37Q96AX2 223 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 TMEM101Q96IK0 257 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 NAA38Q9BRA0 125 aaKnown RBP7.43□□□□□ -1.22
CLCN6-208ENST00000494028 RETNQ9HD89 108 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 CDKN2A-AS1Q9UH64 79 aa7.43□□□□□ -1.22
CLCN6-208ENST00000494028 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
CLCN6-208ENST00000494028 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
CLCN6-208ENST00000494028 VAMP3Q15836 100 aa7.42□□□□□ -1.22
CLCN6-208ENST00000494028 ZFAND6Q6FIF0 208 aa7.42□□□□□ -1.22
CLCN6-208ENST00000494028 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 H3BUT2 72 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 PAX4O43316 350 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 ATP5G1P05496 136 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 UBE2V1Q13404 147 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 C12orf74Q32Q52 190 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 LITAFQ99732 161 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
CLCN6-208ENST00000494028 TEX48A0A1B0GUV7 120 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 F5H768 121 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 G3V4G9 280 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 CCL25O15444 150 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 SPART-AS1P0CW21 52 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
CLCN6-208ENST00000494028 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms