RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
VPS52-220ENST00000493674 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
VPS52-220ENST00000493674 Q6ZUT4 128 aa8.68□□□□□ -1.02
VPS52-220ENST00000493674 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
VPS52-220ENST00000493674 A0A087WX48 190 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 UBE2L6O14933 153 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 GAGE6Q13070 117 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 PMVKQ15126 192 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 ESRGQ1W209 222 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 Q6ZN92 141 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 LYSTQ99698 3801 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 CHCHD5Q9BSY4 110 aa8.67□□□□□ -1.02
VPS52-220ENST00000493674 NUPR2A6NF83 97 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 PRSS1P07477 247 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 PKIAP61925 76 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
VPS52-220ENST00000493674 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 IGLL5B9A064 214 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 MPV17L2Q567V2 206 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 TEX43Q6ZNM6 134 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 APLNQ9ULZ1 77 aa8.65□□□□□ -1.02
VPS52-220ENST00000493674 IGLV4-69A0A075B6H9 119 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 C20orf202A1L168 122 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 F8VRH5 84 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 RBX1P62877 108 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 ZNF664Q8N3J9 261 aa8.64□□□□□ -1.03
VPS52-220ENST00000493674 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
VPS52-220ENST00000493674 MRPS16Q9Y3D3 137 aaKnown RBP8.64□□□□□ -1.03
VPS52-220ENST00000493674 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 H0Y8G0 127 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 TCTAP57738 103 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 DGAT2L7PQ6IED9 249 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 VCX2Q9H322 139 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
VPS52-220ENST00000493674 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
VPS52-220ENST00000493674 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 UBE2D1P51668 147 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
VPS52-220ENST00000493674 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 Q8N3U1 123 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 KLK5Q9Y337 293 aaPredicted RBP8.62□□□□□ -1.03
VPS52-220ENST00000493674 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
VPS52-220ENST00000493674 DPM2O94777 84 aa8.61□□□□□ -1.03
VPS52-220ENST00000493674 PLNP26678 52 aa8.61□□□□□ -1.03
VPS52-220ENST00000493674 KMT2CQ8NEZ4 4911 aaKnown RBP8.61□□□□□ -1.03
VPS52-220ENST00000493674 C11orf86A6NJI1 115 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 IGKCP01834 107 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
VPS52-220ENST00000493674 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
VPS52-220ENST00000493674 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
VPS52-220ENST00000493674 CCL18P55774 89 aa8.59□□□□□ -1.03
VPS52-220ENST00000493674 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
VPS52-220ENST00000493674 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
VPS52-220ENST00000493674 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
VPS52-220ENST00000493674 A0A0J9YXV3 536 aa8.58□□□□□ -1.04
VPS52-220ENST00000493674 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
VPS52-220ENST00000493674 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
VPS52-220ENST00000493674 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
VPS52-220ENST00000493674 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
VPS52-220ENST00000493674 MAJINQ3KP22 176 aa8.57□□□□□ -1.04
VPS52-220ENST00000493674 LBHQ53QV2 105 aaPredicted RBP8.57□□□□□ -1.04
VPS52-220ENST00000493674 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
VPS52-220ENST00000493674 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
VPS52-220ENST00000493674 CCL25O15444 150 aa8.56□□□□□ -1.04
VPS52-220ENST00000493674 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
VPS52-220ENST00000493674 VAMP8Q9BV40 100 aa8.56□□□□□ -1.04
VPS52-220ENST00000493674 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 SIVA1O15304 175 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 ANGP03950 147 aaKnown RBP8.55□□□□□ -1.04
VPS52-220ENST00000493674 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 SEC11AP67812 179 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 REG3AQ06141 175 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
VPS52-220ENST00000493674 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 HERVK_113P63121 156 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 COX6A2Q02221 97 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms