RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
SMARCE1-211ENST00000493660 Q86TA4 180 aa5.36□□□□□ -1.55
SMARCE1-211ENST00000493660 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
SMARCE1-211ENST00000493660 TRAV12-2A0A075B6T6 113 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 F8VRH5 84 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 SERP2Q8N6R1 65 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 SERP1Q9Y6X1 66 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 MAST4O15021 2626 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 A0A0B4J2C4 111 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 M0R3E3 92 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 IGHV3-33P01772 117 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 NPC2P61916 151 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 NSUN5P1Q3KNT7 163 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 DYNLRB2Q8TF09 96 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 DCANP1Q8TF63 244 aa5.35□□□□□ -1.55
SMARCE1-211ENST00000493660 K7EQG2 157 aa5.34□□□□□ -1.55
SMARCE1-211ENST00000493660 IGLV2-11P01706 119 aa5.34□□□□□ -1.55
SMARCE1-211ENST00000493660 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
SMARCE1-211ENST00000493660 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.55
SMARCE1-211ENST00000493660 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
SMARCE1-211ENST00000493660 CUBNO60494 3623 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 IGHV3-30P01768 117 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 IGHV3-30-5P0DP03 117 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 KRTAP24-1Q3LI83 254 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 C9orf47Q6ZRZ4 202 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 COX8CQ7Z4L0 72 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.56
SMARCE1-211ENST00000493660 TRBV30A0A0K0K1B3 111 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 PF4P02776 101 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 TIRAPP58753 221 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 HIST2H2BDQ6DRA6 164 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 RNF182Q8N6D2 247 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 LINC00482Q8N8I6 264 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 SETXQ7Z333 2677 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-211ENST00000493660 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 A0A0J9YY99 117 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 IGFL4Q6B9Z1 124 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 PRNTQ86SH4 94 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 TMEM263Q8WUH6 116 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 C2CD3Q4AC94 2353 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 H7C423 109 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 LINC01561Q8N1V8 128 aa5.32□□□□□ -1.56
SMARCE1-211ENST00000493660 IGKV3-7A0A075B6H7 116 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 PRAC2D3DTV9 90 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 TMEM61Q8N0U2 210 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 PRR25Q96S07 402 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 IGLV1-51P01701 117 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 SLC25A29Q8N8R3 303 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 COPS9Q8WXC6 57 aa5.31□□□□□ -1.56
SMARCE1-211ENST00000493660 SMKR1H3BMG3 65 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 SMCR5Q8TEV8 140 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 NF1P21359 2839 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 ERCC8Q13216 396 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 LAGE3Q14657 143 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 C9orf66Q5T8R8 295 aa5.3□□□□□ -1.56
SMARCE1-211ENST00000493660 IGLV2-18A0A075B6J9 118 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 A0A0J9YX75 114 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 A8MTW9 85 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 CD164Q04900 197 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 Q1RN00 199 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 IL17DQ8TAD2 202 aa5.29□□□□□ -1.56
SMARCE1-211ENST00000493660 COX6CP09669 75 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 Q8TAT8 98 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 RNF185Q96GF1 192 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 BEAN1Q3B7T3 259 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 PAPPA-AS1Q5QFB9 102 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 WFDC9Q8NEX5 89 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
SMARCE1-211ENST00000493660 KNCNA6PVL3 124 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 SH2D1AO60880 128 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 CRIP1P50238 77 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 DEFB131AP59861 70 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 DAND5Q8N907 189 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 A8MZ25 164 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 KLLNB2CW77 178 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 F6UB75 175 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 LST1O00453 97 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 TRIAP1O43715 76 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms