RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
CACUL1-206ENST00000493518 COX6A2Q02221 97 aa11.35□□□□□ -0.59
CACUL1-206ENST00000493518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
CACUL1-206ENST00000493518 H3BMM0 161 aa11.34□□□□□ -0.59
CACUL1-206ENST00000493518 COX6CP09669 75 aa11.34□□□□□ -0.59
CACUL1-206ENST00000493518 UBE2WQ96B02 151 aa11.34□□□□□ -0.59
CACUL1-206ENST00000493518 AKAP9Q99996 3911 aa11.33□□□□□ -0.59
CACUL1-206ENST00000493518 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.59
CACUL1-206ENST00000493518 GAGE12JA6NER3 117 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 GAGE4Q13068 117 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 GAGE5Q13069 117 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 LINC00694P0DN24 101 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 FAM104AQ969W3 186 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
CACUL1-206ENST00000493518 RS1O15537 224 aa11.32□□□□□ -0.6
CACUL1-206ENST00000493518 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
CACUL1-206ENST00000493518 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
CACUL1-206ENST00000493518 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 H7C423 109 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 CHCHD7Q9BUK0 85 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 LITAFQ99732 161 aa11.31□□□□□ -0.6
CACUL1-206ENST00000493518 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 CCDC179H3BU77 68 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
CACUL1-206ENST00000493518 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 LINC01356Q8N9X3 169 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
CACUL1-206ENST00000493518 TRBV10-2A0A0K0K1G8 114 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 TMEM101Q96IK0 257 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 APCP25054 2843 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 KRTAP10-9P60411 292 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 MIAQ16674 131 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
CACUL1-206ENST00000493518 Q6ZTI0 123 aa11.28□□□□□ -0.6
CACUL1-206ENST00000493518 Q8N2B8 174 aa11.28□□□□□ -0.6
CACUL1-206ENST00000493518 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
CACUL1-206ENST00000493518 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
CACUL1-206ENST00000493518 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
CACUL1-206ENST00000493518 SBSPONQ8IVN8 264 aa11.27□□□□□ -0.61
CACUL1-206ENST00000493518 Q9HAA7 133 aa11.26□□□□□ -0.61
CACUL1-206ENST00000493518 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
CACUL1-206ENST00000493518 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
CACUL1-206ENST00000493518 STHQ8IWL8 128 aa11.26□□□□□ -0.61
CACUL1-206ENST00000493518 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
CACUL1-206ENST00000493518 NDUFV3P56181 108 aaKnown RBP11.25□□□□□ -0.61
CACUL1-206ENST00000493518 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
CACUL1-206ENST00000493518 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
CACUL1-206ENST00000493518 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 ITPR2Q14571 2701 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 BRI3O95415 125 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 GAGE7O76087 117 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 INSP01308 110 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 IFITM1P13164 125 aa11.24□□□□□ -0.61
CACUL1-206ENST00000493518 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
CACUL1-206ENST00000493518 PRORYQ9H606 182 aa11.23□□□□□ -0.61
CACUL1-206ENST00000493518 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
CACUL1-206ENST00000493518 PFN2P35080 140 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 GAGE6Q13070 117 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 PYGO1Q9Y3Y4 419 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
CACUL1-206ENST00000493518 TMEM89A2RUT3 159 aa11.21□□□□□ -0.61
CACUL1-206ENST00000493518 UBE2L6O14933 153 aa11.21□□□□□ -0.61
CACUL1-206ENST00000493518 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
CACUL1-206ENST00000493518 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
CACUL1-206ENST00000493518 CITED1Q99966 193 aa11.2□□□□□ -0.62
CACUL1-206ENST00000493518 A0A096LPF7 62 aa11.2□□□□□ -0.62
CACUL1-206ENST00000493518 NBPF19A0A087WUL8 3843 aa11.2□□□□□ -0.62
CACUL1-206ENST00000493518 PEMTQ9UBM1 199 aa11.2□□□□□ -0.62
CACUL1-206ENST00000493518 HIST2H2BCQ6DN03 193 aa11.19□□□□□ -0.62
CACUL1-206ENST00000493518 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
CACUL1-206ENST00000493518 YAE1D1Q9NRH1 226 aa11.19□□□□□ -0.62
CACUL1-206ENST00000493518 LST1O00453 97 aa11.19□□□□□ -0.62
CACUL1-206ENST00000493518 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
CACUL1-206ENST00000493518 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
CACUL1-206ENST00000493518 OR13C6PQ8NH95 151 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 LINC00158P58513 81 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 FASNP49327 2511 aaKnown RBP11.18□□□□□ -0.62
CACUL1-206ENST00000493518 NTM-AS1Q6ZSK4 140 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 Q96MF0 132 aa11.18□□□□□ -0.62
CACUL1-206ENST00000493518 ATP5G1P05496 136 aa11.17□□□□□ -0.62
CACUL1-206ENST00000493518 Q6YL49 198 aa11.17□□□□□ -0.62
CACUL1-206ENST00000493518 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
CACUL1-206ENST00000493518 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
CACUL1-206ENST00000493518 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
CACUL1-206ENST00000493518 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms