RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ZNF876PQ49A33 203 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 U3KQK5 164 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
CSTF1-206ENST00000493039 IGHV4-4A0A075B6R2 117 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 TRGV1A0A0A0MS02 117 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 C12orf74Q32Q52 190 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 LGALS9BQ3B8N2 356 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 PHLDA3Q9Y5J5 127 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 F2Z2F3 143 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 M0R381 172 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 DEFB130BP0DP73 79 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 DEFB130AP0DP74 79 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 LINC00310P59036 64 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 PRELID3AQ96N28 172 aa6.63□□□□□ -1.35
CSTF1-206ENST00000493039 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 SLC25A34Q6PIV7 304 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 LINC01561Q8N1V8 128 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 PFN2P35080 140 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
CSTF1-206ENST00000493039 KIF25-AS1Q9Y6Z4 181 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
CSTF1-206ENST00000493039 LINC00315P59091 139 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 SPANXN1Q5VSR9 72 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 CFAP126Q5VTH2 177 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 PLECQ15149 4684 aaKnown RBP6.61□□□□□ -1.35
CSTF1-206ENST00000493039 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 APOMO95445 188 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 Q6ZTC4 211 aa6.61□□□□□ -1.35
CSTF1-206ENST00000493039 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 DPM2O94777 84 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 TMEM191AQ9H0A3 160 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 SERF1AO75920 110 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 NDUFC2O95298 119 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 IGHV3-53P01767 116 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 FGF6P10767 208 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 DAD1P61803 113 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 CACNG7P62955 275 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 TWIST1Q15672 202 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 Q6ZSN1 163 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-206ENST00000493039 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
CSTF1-206ENST00000493039 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.35
CSTF1-206ENST00000493039 SYS1-DBNDD2H3BUS1 97 aa6.59□□□□□ -1.35
CSTF1-206ENST00000493039 SNCGO76070 127 aa6.59□□□□□ -1.35
CSTF1-206ENST00000493039 C3orf79P0CE67 100 aa6.59□□□□□ -1.35
CSTF1-206ENST00000493039 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 TRAV4A0A0B4J268 109 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 UQCRQO14949 82 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 FHL2Q14192 279 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 PMCHL2Q9BQD1 86 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 A8MWV9 139 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 TRAPPC1Q9Y5R8 145 aa6.58□□□□□ -1.36
CSTF1-206ENST00000493039 RIGQ13278 110 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 TRAV9-1A0A075B6T8 112 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 GAS8-AS1O95177 125 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 ATP5G1P05496 136 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 TMEM258P61165 79 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 FAM74A4Q5TZK3 123 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 ATP5L2Q7Z4Y8 100 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 LYSTQ99698 3801 aa6.57□□□□□ -1.36
CSTF1-206ENST00000493039 A0A0U1RQV1 116 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 H3BMG7 143 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 HBBP68871 147 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 AMN1Q8IY45 258 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
CSTF1-206ENST00000493039 KLK5Q9Y337 293 aaPredicted RBP6.56□□□□□ -1.36
CSTF1-206ENST00000493039 H7C1H1 209 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 NCR2O95944 276 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 P0DMU3 169 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 HTN3P15516 51 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 TMEM136Q6ZRR5 245 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 MRPL55Q7Z7F7 128 aaKnown RBP6.55□□□□□ -1.36
CSTF1-206ENST00000493039 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
CSTF1-206ENST00000493039 DEFB131BA0A096LNP1 70 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 ZC2HC1BQ5TFG8 222 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms