RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 HINT1P49773 126 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-208ENST00000492896 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-208ENST00000492896 FAM104AQ969W3 186 aa6.43□□□□□ -1.38
SMARCC1-208ENST00000492896 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 A0A0J9YXV3 536 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 PAX4O43316 350 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 ATP5G1P05496 136 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 ZNF22P17026 224 aaPredicted RBP6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 HSD52Q0P140 79 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 OR5A1Q8NGJ0 315 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 RETNQ9HD89 108 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 CSDC2Q9Y534 153 aaKnown RBP6.42□□□□□ -1.38
SMARCC1-208ENST00000492896 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 TINCRA0A1B0GVN0 87 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 TMEM223A0PJW6 202 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 ZNF25P17030 456 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 MPV17L2Q567V2 206 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 COL5A1-AS1Q5SY13 56 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 BVES-AS1Q5T3Y7 98 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 MAPKAPK5-AS1Q8N8E1 139 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 ANK2Q01484 3957 aa6.41□□□□□ -1.38
SMARCC1-208ENST00000492896 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
SMARCC1-208ENST00000492896 F5H768 121 aa6.4□□□□□ -1.38
SMARCC1-208ENST00000492896 UBE2D1P51668 147 aa6.4□□□□□ -1.38
SMARCC1-208ENST00000492896 GAGE6Q13070 117 aa6.4□□□□□ -1.38
SMARCC1-208ENST00000492896 C11orf68Q9H3H3 251 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-208ENST00000492896 STAB1Q9NY15 2570 aa6.4□□□□□ -1.39
SMARCC1-208ENST00000492896 A0A0J9YY99 117 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 A0A1B0GV90 55 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 LEPROTO15243 131 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 HTN3P15516 51 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 LGALS3P17931 250 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 GEMIN7Q9H840 131 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 MAST4O15021 2626 aa6.39□□□□□ -1.39
SMARCC1-208ENST00000492896 TRAV26-1A0A087WT03 109 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 H3BRM9 83 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 J3QQQ9 107 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 TIRAPP58753 221 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 TSPEAR-AS2P59090 65 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 HERVK_113P63121 156 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 SEC11AP67812 179 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 LINC00469Q8N7U9 141 aa6.38□□□□□ -1.39
SMARCC1-208ENST00000492896 IGHV3-64A0A075B6Q5 118 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 IGLV5-45A0A087WSX0 123 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 MRPL23Q16540 153 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 TAL2Q16559 108 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 C12orf74Q32Q52 190 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 ICOSQ9Y6W8 199 aa6.37□□□□□ -1.39
SMARCC1-208ENST00000492896 A0A096LPF7 62 aa6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 TRAV13-1A0A0B4J241 112 aa6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 IGHV1-58A0A0C4DH39 117 aa6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 KPRPQ5T749 579 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 SCGB1D4Q6XE38 83 aa6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 SPATA25Q9BR10 227 aa6.36□□□□□ -1.39
SMARCC1-208ENST00000492896 A0A0J9YWU9 116 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 A6NDN8 102 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 K7EIL1 84 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 IGHV3-30-3P0DP02 117 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 GCSHP23434 173 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 MDFIQ99750 246 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
SMARCC1-208ENST00000492896 IGLV4-60A0A075B6I1 120 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 TRAV8-3A0A0A6YYJ7 113 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 PRB2P02812 416 aaPredicted RBP6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 COX6A2Q02221 97 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 CEND1Q8N111 149 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
SMARCC1-208ENST00000492896 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 A0A1B0GUV1 79 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 H3BNG1 76 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 FXYD2P54710 66 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 RBX1P62877 108 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 LELP1Q5T871 98 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 Q6ZTC4 211 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 TM2D3Q9BRN9 247 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 COL6A5A8TX70 2615 aa6.33□□□□□ -1.4
SMARCC1-208ENST00000492896 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 HUWE1Q7Z6Z7 4374 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-208ENST00000492896 NBEAL2Q6ZNJ1 2754 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms