RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SZT2Q5T011 3432 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 CDH23Q9H251 3354 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 IGKV3-7A0A075B6H7 116 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 IGLV4-3A0A075B6K6 122 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 TRBV10-1A0A0K0K1A3 114 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 FAM240AA0A1B0GVK7 77 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 H3BMM0 161 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 H3BUX3 64 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 NDUFA1O15239 70 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 RS1O15537 224 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 TRBV12-3P01733 135 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3-11P01762 117 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 TRACP01848 142 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 ATP5G1P05496 136 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 MSMBP08118 114 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 CXCL5P42830 114 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 XGP55808 180 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 NDUFV3P56181 108 aaKnown RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 DAZ2Q13117 558 aaKnown RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 ZNF56Q15929 161 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 LY6EQ16553 131 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 Q1RN00 199 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 HIGD2BQ4VC39 106 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 MEIG1Q5JSS6 88 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 FAM74A4Q5TZK3 123 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 DAZ4Q86SG3 579 aaKnown RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 C15orf53Q8NAA6 179 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 FAM104AQ969W3 186 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM101Q96IK0 257 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC01587Q99440 93 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 CITED2Q99967 270 aaPredicted RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 DAZ3Q9NR90 486 aaKnown RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 NDUFA12Q9UI09 145 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 UBE2D4Q9Y2X8 147 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 WDFY3Q8IZQ1 3526 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 NCOR1O75376 2440 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 VPS13AQ96RL7 3174 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 SPTBN1Q01082 2364 aaKnown RBP1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 TACC2O95359 2948 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 ACACAQ13085 2346 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 CEP250Q9BV73 2442 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 SPEGQ15772 3267 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV13-2A0A0B4J235 113 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 TRBV7-7A0A0K0K1E9 115 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 TEX49A0A1B0GTD5 131 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 A0A1W2PPR1 153 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 H7C2G1 150 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 LST1O00453 97 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 COX7A2LO14548 114 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 TGFAP01135 160 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 INAFM2P0DMQ5 153 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 HTN1P15515 57 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 RPL28P46779 137 aaKnown RBP1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 EMP1P54849 157 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 ATP5J2P56134 94 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 DEFB131AP59861 70 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 DEFB1P60022 68 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 ZNF415Q09FC8 603 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 MIAQ16674 131 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 SPINK13Q1W4C9 94 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 DEFB114Q30KQ6 69 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 SFTA2Q6UW10 78 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 BRD3OSQ6XYD6 125 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 SDIM1Q6ZPB5 146 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 C5orf38Q86SI9 138 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 Q8NBF4 154 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00308Q8TCZ7 52 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 UBE2WQ96B02 151 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 OVOL2Q9BRP0 275 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 CHCHD7Q9BUK0 85 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 CDC42SE2Q9NRR3 84 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 ICOSQ9Y6W8 199 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 VCANP13611 3396 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 LRBAP50851 2863 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 CACNA1BQ00975 2339 aa1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.44□□□□□ -2.18
SNRNP40-207ENST00000491106 OTOGLQ3ZCN5 2332 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 SPTA1P02549 2419 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV12-2A0A075B6T6 113 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3OR16-10A0A075B7F0 116 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV8-3A0A0A6YYJ7 113 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TRBV6-4A0A1B0GX49 114 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 A0A1B0GX51 115 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1BA6NDE4 496 aaKnown RBP1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1EA6NEQ0 496 aaKnown RBP1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 H3BQ85 93 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 UQCRQO14949 82 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 BCE1O60756 84 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1DP0C7P1 496 aaKnown RBP1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DNAH10OSP0CZ25 163 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1A1P0DJD3 496 aaKnown RBP1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1CP0DJD4 496 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 CD28P10747 220 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 SYNJ2BPP57105 145 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TSPEAR-AS2P59090 65 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 COX6A2Q02221 97 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DEFB112Q30KQ8 113 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 C6orf226Q5I0X4 101 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 S100A7L2Q5SY68 101 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms