RNA–Protein interactions for RNA: ENST00000490914.1

SSB-211, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-211ENST00000490914 TRAV22A0A0B4J277 110 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 M0R143 59 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 IGLC1P0CG04 106 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 Q6JHZ5 121 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 FAM213BQ8TBF2 198 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 VAMP8Q9BV40 100 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 SPCS1Q9Y6A9 102 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 BDP1A6H8Y1 2624 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 F8P00451 2351 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 NWD2Q9ULI1 1742 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 PARP14Q460N5 1801 aa0.41□□□□□ -2.34
SSB-211ENST00000490914 APCP25054 2843 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 GOLGA4Q13439 2230 aaKnown RBP0.4□□□□□ -2.35
SSB-211ENST00000490914 A0A1B0GWA3 101 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 hADV29S1A0JD25 119 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 M0R3E3 92 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 NDUFC1O43677 76 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 S100A8P05109 93 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 CDC42SE2Q9NRR3 84 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 GOLGA3Q08378 1498 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 SHANK2Q9UPX8 1470 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 SSC5DA1L4H1 1573 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.35
SSB-211ENST00000490914 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
SSB-211ENST00000490914 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 ARFGEF1Q9Y6D6 1849 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 FAM223AQ8IWN6 122 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 FDCSPQ8NFU4 85 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 CNFNQ9BYD5 112 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 DPY30Q9C005 99 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 SPTBN2O15020 2390 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 TPRP12270 2363 aaKnown RBP0.39□□□□□ -2.35
SSB-211ENST00000490914 TTC28Q96AY4 2481 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
SSB-211ENST00000490914 ARHGAP5Q13017 1502 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 TNS1Q9HBL0 1735 aaKnown RBP0.38□□□□□ -2.35
SSB-211ENST00000490914 NRKQ7Z2Y5 1582 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 PEG3Q9GZU2 1588 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 BCE1O60756 84 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 SPINK1P00995 79 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 SAA2P0DJI9 122 aaPredicted RBP0.38□□□□□ -2.35
SSB-211ENST00000490914 UBE2D3P61077 147 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 UBE2D2P62837 147 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 COL5A1-AS1Q5SY13 56 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 NCMAPQ5T1S8 102 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 TMEM263Q8WUH6 116 aaKnown RBP0.38□□□□□ -2.35
SSB-211ENST00000490914 PMCHL2Q9BQD1 86 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 PRO1933Q9H354 126 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 PRO0255Q9UI72 69 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 CNTLNQ9NXG0 1405 aa0.38□□□□□ -2.35
SSB-211ENST00000490914 RIMS1Q86UR5 1692 aaKnown RBP0.37□□□□□ -2.35
SSB-211ENST00000490914 CACNA1CQ13936 2221 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 MYH8P13535 1937 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 A0A0G2JND7 137 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 ATOX1O00244 68 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 CFDP00746 253 aaPredicted RBP0.37□□□□□ -2.35
SSB-211ENST00000490914 PRH1P02810 166 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 PMCHL1Q16048 86 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 LINC00472Q9H8W2 130 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 CACFD1Q9UGQ2 172 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 FAM208BQ5VWN6 2430 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 QRICH2Q9H0J4 1663 aa0.37□□□□□ -2.35
SSB-211ENST00000490914 ERCC6L2Q5T890 1561 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 PIEZO1Q92508 2521 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 PATJQ8NI35 1801 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 IFT172Q9UG01 1749 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 PTPRZ1P23471 2315 aaPredicted RBP0.36□□□□□ -2.35
SSB-211ENST00000490914 DOCK1Q14185 1865 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 FXYD6-FXYD2A0A087WZ82 144 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 FAM223BA6NKX1 122 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 MPC2O95563 127 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 MT-ATP8P03928 68 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 FAUP35544 74 aaKnown RBP0.36□□□□□ -2.35
SSB-211ENST00000490914 PKIAP61925 76 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 PIGYQ3MUY2 71 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 Q5BKY6 102 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 SMR3AQ99954 134 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 Q9H521 79 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 ABCC5O15440 1437 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 CUL7Q14999 1698 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 UNC13BO14795 1591 aa0.36□□□□□ -2.35
SSB-211ENST00000490914 ROBO1Q9Y6N7 1651 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 TRBV6-1A0A0K0K1D8 114 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 C7orf77A4D0Y5 90 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 UQCRHP07919 91 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 PSMG4Q5JS54 123 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 C10orf113Q5VZT2 155 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 Q8IZM0 81 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 SERP2Q8N6R1 65 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 SPRR4Q96PI1 79 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 TRGV9Q99603 122 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 TP53AIP1Q9HCN2 124 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 DOCK2Q92608 1830 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
SSB-211ENST00000490914 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
SSB-211ENST00000490914 TNCP24821 2201 aa0.34□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms