RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 KIDINS220Q9ULH0 1771 aa0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 CPSF1Q10570 1443 aaKnown RBP0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 EP300Q09472 2414 aaPredicted RBP0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 ADGRB1O14514 1584 aa0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 ERCC6L2Q5T890 1561 aa0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 CPDO75976 1380 aa0.18□□□□□ -2.38
PRPF4B-207ENST00000490399 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 POLA1P09884 1462 aaPredicted RBP0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 BCL9LQ86UU0 1499 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 TRAV30A0A087WSZ9 112 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 TRGV1A0A0A0MS02 117 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 TRBV6-1A0A0K0K1D8 114 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 A0A1B0GWA3 101 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 LRRC37A2A6NM11 1700 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 F8VRH5 84 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 H3BQ15 152 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 M0R135 149 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 NDUFC1O43677 76 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 GNG7O60262 68 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 SAA2P0DJI9 122 aaPredicted RBP0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 GNG11P61952 73 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 UBA52P62987 128 aaKnown RBP0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 PPP3R1P63098 170 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 NRKQ7Z2Y5 1582 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 C5orf38Q86SI9 138 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 Q8N8P6 123 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 FDCSPQ8NFU4 85 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 USMG5Q96IX5 58 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 WFDC6Q9BQY6 131 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 AGPAT4-IT1Q9H0P7 198 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 GNG8Q9UK08 70 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 NWD2Q9ULI1 1742 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 LINC00312Q9Y6C7 94 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 SETBP1Q9Y6X0 1596 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 LAMA3Q16787 3333 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 ABCC2Q92887 1545 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 MXRA5Q9NR99 2828 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 ROCK2O75116 1388 aaKnown RBP0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 MYO9AB2RTY4 2548 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 TGP01266 2768 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
PRPF4B-207ENST00000490399 ACACBO00763 2458 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 A2ML1A8K2U0 1454 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 MRC1P22897 1456 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 NUP210Q8TEM1 1887 aaPredicted RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 SYNJ1O43426 1573 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 ABCC5O15440 1437 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 NSD3Q9BZ95 1437 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 TRBV7-3A0A075B6L6 115 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 TRBV7-4A0A0J9YYF1 115 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 C20orf202A1L168 122 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 ZNF815PA8K554 130 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 LOC730098B7Z3J9 87 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 HCG22E2RYF7 251 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 H3BQF6 201 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 K7EP13 123 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 SPINK4O60575 86 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 SFT2D2O95562 160 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 TFF1P04155 84 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 LINC00032P0C843 101 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 S100A1P23297 94 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 SNCAP37840 140 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 RPL38P63173 70 aaKnown RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 RBM3P98179 157 aaKnown RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 WFDC2Q14508 124 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 DEFB109BQ30KR1 87 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 Q6JHZ5 121 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 SSBP3-AS1Q7Z2R9 100 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 PP6455Q8WZ26 134 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 DPH3Q96FX2 82 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 FAM167A-AS1Q96KT0 104 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 CGREF1Q99674 301 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 FXYD6Q9H0Q3 95 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 TP53AIP1Q9HCN2 124 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 NXT2Q9NPJ8 142 aaKnown RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 MANBALQ9NQG1 85 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 PSENENQ9NZ42 101 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 PRO1854Q9UHT4 67 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 U3KQA8 63 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 CTTNBP2Q8WZ74 1663 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 ACANP16112 2415 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 NHSL1Q5SYE7 1610 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 GOLGA3Q08378 1498 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 FYCO1Q9BQS8 1478 aa0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 LAMA2P24043 3122 aaKnown RBP0.16□□□□□ -2.38
PRPF4B-207ENST00000490399 DIP2CQ9Y2E4 1556 aa0.15□□□□□ -2.38
PRPF4B-207ENST00000490399 MYH3P11055 1940 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 C10orf71Q711Q0 1435 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 UNC80Q8N2C7 3258 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 RBBP6Q7Z6E9 1792 aaKnown RBP0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 DSPP15924 2871 aaKnown RBP0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 ARHGAP5Q13017 1502 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 EHBP1L1Q8N3D4 1523 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 ARHGEF12Q9NZN5 1544 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 A0A087WTM6 91 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 A0A1B0GV90 55 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 CHKB-CPT1BH3BT56 60 aa0.15□□□□□ -2.39
PRPF4B-207ENST00000490399 HMGN4O00479 90 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms