RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 FAM240AA0A1B0GVK7 77 aa6.63□□□□□ -1.35
LSAMP-205ENST00000490035 CACNA1AO00555 2505 aa6.63□□□□□ -1.35
LSAMP-205ENST00000490035 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
LSAMP-205ENST00000490035 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-205ENST00000490035 ZFHX2Q9C0A1 2572 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-205ENST00000490035 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-205ENST00000490035 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-205ENST00000490035 TRAV23DV6A0A075B6W5 121 aa6.62□□□□□ -1.35
LSAMP-205ENST00000490035 CHCHD7Q9BUK0 85 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 MUC4Q99102 2169 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 BDP1A6H8Y1 2624 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 M0R378 163 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 LELP1Q5T871 98 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 TRAV10A0A0B4J240 114 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 Q6Q795 121 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 C11orf71Q6IPW1 123 aa6.61□□□□□ -1.35
LSAMP-205ENST00000490035 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-205ENST00000490035 RNF183Q96D59 192 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 TTC28Q96AY4 2481 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 KLLNB2CW77 178 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 YPEL4Q96NS1 127 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 BRI3O95415 125 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 Q6ZTI0 123 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 ZNF580Q9UK33 172 aa6.6□□□□□ -1.35
LSAMP-205ENST00000490035 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
LSAMP-205ENST00000490035 NRACQ8N912 160 aa6.59□□□□□ -1.35
LSAMP-205ENST00000490035 RNF185Q96GF1 192 aa6.59□□□□□ -1.35
LSAMP-205ENST00000490035 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
LSAMP-205ENST00000490035 LST1O00453 97 aa6.59□□□□□ -1.36
LSAMP-205ENST00000490035 TRIAP1O43715 76 aa6.59□□□□□ -1.36
LSAMP-205ENST00000490035 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.36
LSAMP-205ENST00000490035 Q8IZM0 81 aa6.59□□□□□ -1.36
LSAMP-205ENST00000490035 BRK1Q8WUW1 75 aa6.59□□□□□ -1.36
LSAMP-205ENST00000490035 GDF5OSQ5U4N7 250 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 Q8N6K4 173 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 MYO18BQ8IUG5 2567 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 C9orf85Q96MD7 179 aa6.58□□□□□ -1.36
LSAMP-205ENST00000490035 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
LSAMP-205ENST00000490035 A0A1W2PNU3 283 aaPredicted RBP6.57□□□□□ -1.36
LSAMP-205ENST00000490035 ZNF295-AS1Q8N0V1 137 aa6.57□□□□□ -1.36
LSAMP-205ENST00000490035 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
LSAMP-205ENST00000490035 CRIP1P50238 77 aa6.57□□□□□ -1.36
LSAMP-205ENST00000490035 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 IGLV2-11P01706 119 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 CCKP06307 115 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 TP53TG3Q9ULZ0 132 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 C20orf197Q8N268 126 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
LSAMP-205ENST00000490035 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
LSAMP-205ENST00000490035 UBE2D1P51668 147 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 NDUFA7O95182 113 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 SDIM1Q6ZPB5 146 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 UBE2D4Q9Y2X8 147 aa6.56□□□□□ -1.36
LSAMP-205ENST00000490035 A0A087WZ39 114 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 TSHBP01222 138 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 ESM1Q9NQ30 184 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 COX7CP15954 63 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 ENHOQ6UWT2 76 aa6.55□□□□□ -1.36
LSAMP-205ENST00000490035 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 M0QXV9 152 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 COX8CQ7Z4L0 72 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 CRIP3Q6Q6R5 217 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 Q8N976 141 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 RNASE3P12724 160 aaKnown RBP6.54□□□□□ -1.36
LSAMP-205ENST00000490035 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-205ENST00000490035 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-205ENST00000490035 PTH2Q96A98 100 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 Q6JHZ5 121 aa6.54□□□□□ -1.36
LSAMP-205ENST00000490035 MYO9AB2RTY4 2548 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 DCANP1Q8TF63 244 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 RBX1P62877 108 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 Q6ZPA2 131 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 MT-ATP8P03928 68 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 Q6ZSV7 163 aa6.53□□□□□ -1.36
LSAMP-205ENST00000490035 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 LRRK2Q5S007 2527 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 IGKV2-24A0A0C4DH68 120 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 PLA2G5P39877 138 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 C2orf91Q6ZV80 131 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 ZNF702PQ9H963 129 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 Q8N9L7 120 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 LINC00959A0A1B0GUT2 108 aa6.52□□□□□ -1.37
LSAMP-205ENST00000490035 DEFB4AO15263 64 aa6.51□□□□□ -1.37
LSAMP-205ENST00000490035 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms