RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 S4R3C0 116 aa7.26□□□□□ -1.25
NOD1-208ENST00000489614 ATOX1O00244 68 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 AGPAT4-IT1Q9H0P7 198 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 A0A087WVE0 104 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 H3BT86 120 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 IGHV3-23P01764 117 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 IL17DQ8TAD2 202 aa7.25□□□□□ -1.25
NOD1-208ENST00000489614 ATP5G1P05496 136 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 COX6CP09669 75 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 IGKV3D-7A0A0C4DH55 119 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 NDUFA4O00483 81 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 SPANXCQ9NY87 97 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 C1orf195Q5TG92 126 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
NOD1-208ENST00000489614 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 BUB3O43684 328 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 CLEC19AQ6UXS0 136 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
NOD1-208ENST00000489614 UBE2E2Q96LR5 201 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 GPHB5Q86YW7 130 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
NOD1-208ENST00000489614 ANK2Q01484 3957 aa7.22□□□□□ -1.25
NOD1-208ENST00000489614 SYNJ2BPP57105 145 aa7.22□□□□□ -1.25
NOD1-208ENST00000489614 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
NOD1-208ENST00000489614 NSD1Q96L73 2696 aaPredicted RBP7.22□□□□□ -1.25
NOD1-208ENST00000489614 K7EMT4 169 aa7.22□□□□□ -1.25
NOD1-208ENST00000489614 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
NOD1-208ENST00000489614 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.25
NOD1-208ENST00000489614 A0A1W2PRX2 142 aa7.21□□□□□ -1.25
NOD1-208ENST00000489614 ACYP1P07311 99 aa7.21□□□□□ -1.25
NOD1-208ENST00000489614 PDE6HQ13956 83 aa7.21□□□□□ -1.25
NOD1-208ENST00000489614 UNQ9165/PRO28630Q6UXU0 137 aa7.21□□□□□ -1.25
NOD1-208ENST00000489614 LINC01561Q8N1V8 128 aa7.21□□□□□ -1.25
NOD1-208ENST00000489614 IGLV4-69A0A075B6H9 119 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 SOCS3O14543 225 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 RPL18AQ02543 176 aaKnown RBP7.21□□□□□ -1.26
NOD1-208ENST00000489614 FHL2Q14192 279 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 LYPD1Q8N2G4 141 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 DEFB121Q5J5C9 76 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 C4orf3Q8WVX3 66 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 C16orf92Q96LL3 132 aa7.21□□□□□ -1.26
NOD1-208ENST00000489614 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
NOD1-208ENST00000489614 I3L3M4 83 aa7.2□□□□□ -1.26
NOD1-208ENST00000489614 SUMO2P61956 95 aaKnown RBP7.2□□□□□ -1.26
NOD1-208ENST00000489614 AMELXQ99217 191 aa7.2□□□□□ -1.26
NOD1-208ENST00000489614 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
NOD1-208ENST00000489614 LST1O00453 97 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 RPL39P62891 51 aaKnown RBP7.19□□□□□ -1.26
NOD1-208ENST00000489614 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 COX8CQ7Z4L0 72 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 C2CD3Q4AC94 2353 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 INAFM1C9JVW0 142 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 M0R381 172 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 PROK1P58294 105 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 MGPP08493 103 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 KRTAP10-3P60369 221 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
NOD1-208ENST00000489614 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
NOD1-208ENST00000489614 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 CNFNQ9BYD5 112 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 DAZ1Q9NQZ3 744 aaKnown RBP7.19□□□□□ -1.26
NOD1-208ENST00000489614 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
NOD1-208ENST00000489614 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
NOD1-208ENST00000489614 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 TSHBP01222 138 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 C11orf21Q9P2W6 132 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 CXCL5P42830 114 aa7.18□□□□□ -1.26
NOD1-208ENST00000489614 IGHV4OR15-8A0A075B7B6 117 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 A0A087WW49 117 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
NOD1-208ENST00000489614 TMEM243Q9BU79 118 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 TIRAPP58753 221 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
NOD1-208ENST00000489614 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
NOD1-208ENST00000489614 IGHV3-11P01762 117 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
NOD1-208ENST00000489614 LINC00482Q8N8I6 264 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 PRAC2D3DTV9 90 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 NXPH4O95158 308 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 WNK1Q9H4A3 2382 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
NOD1-208ENST00000489614 NOTCH3Q9UM47 2321 aa7.15□□□□□ -1.26
NOD1-208ENST00000489614 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms