RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
C9orf3-220ENST00000489318 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 A0A1B0GUV1 79 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 PKIAP61925 76 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 CDC42SE2Q9NRR3 84 aa7.9□□□□□ -1.14
C9orf3-220ENST00000489318 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
C9orf3-220ENST00000489318 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
C9orf3-220ENST00000489318 DPM2O94777 84 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 PLNP26678 52 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 GAGE6Q13070 117 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 AMMECR1LQ6DCA0 310 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 NFE4Q86UQ8 179 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 OR5A1Q8NGJ0 315 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 VCX2Q9H322 139 aa7.89□□□□□ -1.15
C9orf3-220ENST00000489318 TRAV9-2A0A087WT02 112 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 IGKCP01834 107 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 IGLC3P0DOY3 106 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 S100A12P80511 92 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 DGAT2L7PQ6IED9 249 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
C9orf3-220ENST00000489318 IGLV4-60A0A075B6I1 120 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 RBX1P62877 108 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 MPV17L2Q567V2 206 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 C2orf88Q9BSF0 95 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 DYNC2H1Q8NCM8 4307 aaKnown RBP7.87□□□□□ -1.15
C9orf3-220ENST00000489318 FBN3Q75N90 2809 aa7.87□□□□□ -1.15
C9orf3-220ENST00000489318 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
C9orf3-220ENST00000489318 UBE2D1P51668 147 aa7.86□□□□□ -1.15
C9orf3-220ENST00000489318 ESRGQ1W209 222 aa7.86□□□□□ -1.15
C9orf3-220ENST00000489318 RNASE13Q5GAN3 156 aaKnown RBP7.86□□□□□ -1.15
C9orf3-220ENST00000489318 IGLV5-45A0A087WSX0 123 aa7.85□□□□□ -1.15
C9orf3-220ENST00000489318 TRAV8-6A0A0B4J262 113 aa7.85□□□□□ -1.15
C9orf3-220ENST00000489318 NUPR2A6NF83 97 aa7.85□□□□□ -1.15
C9orf3-220ENST00000489318 MAJINQ3KP22 176 aa7.85□□□□□ -1.15
C9orf3-220ENST00000489318 CHAC1Q9BUX1 264 aa7.85□□□□□ -1.15
C9orf3-220ENST00000489318 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 TINCRA0A1B0GVN0 87 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 IGLL5B9A064 214 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 SPATA45Q537H7 98 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 MRPS16Q9Y3D3 137 aaKnown RBP7.84□□□□□ -1.15
C9orf3-220ENST00000489318 PAM16Q9Y3D7 125 aa7.84□□□□□ -1.15
C9orf3-220ENST00000489318 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
C9orf3-220ENST00000489318 TCTAP57738 103 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 SEC11AP67812 179 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 WFDC10BQ8IUB3 73 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 UPK3BQ9BT76 320 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
C9orf3-220ENST00000489318 DNAH7Q8WXX0 4024 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 TMEM262E9PQX1 116 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 HERVK_113P63121 156 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 LINC01556Q5JQF7 62 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 Q8N3U1 123 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 PRR34Q9NV39 138 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 LINC00588Q9Y4M8 146 aa7.82□□□□□ -1.16
C9orf3-220ENST00000489318 CCL25O15444 150 aa7.81□□□□□ -1.16
C9orf3-220ENST00000489318 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
C9orf3-220ENST00000489318 STPG4Q8N801 248 aa7.81□□□□□ -1.16
C9orf3-220ENST00000489318 LINC00959A0A1B0GUT2 108 aa7.8□□□□□ -1.16
C9orf3-220ENST00000489318 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
C9orf3-220ENST00000489318 E9PLD3 99 aa7.8□□□□□ -1.16
C9orf3-220ENST00000489318 CCL18P55774 89 aa7.8□□□□□ -1.16
C9orf3-220ENST00000489318 KLK5Q9Y337 293 aaPredicted RBP7.8□□□□□ -1.16
C9orf3-220ENST00000489318 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
C9orf3-220ENST00000489318 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
C9orf3-220ENST00000489318 ANGP03950 147 aaKnown RBP7.79□□□□□ -1.16
C9orf3-220ENST00000489318 REG3AQ06141 175 aa7.79□□□□□ -1.16
C9orf3-220ENST00000489318 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
C9orf3-220ENST00000489318 LINC00269Q8N2A0 174 aa7.79□□□□□ -1.16
C9orf3-220ENST00000489318 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
C9orf3-220ENST00000489318 COX8AP10176 69 aa7.78□□□□□ -1.16
C9orf3-220ENST00000489318 HERVK_113P61574 105 aa7.78□□□□□ -1.16
C9orf3-220ENST00000489318 COX6A2Q02221 97 aa7.78□□□□□ -1.16
C9orf3-220ENST00000489318 GEMIN7Q9H840 131 aaKnown RBP7.78□□□□□ -1.16
C9orf3-220ENST00000489318 CDKN2A-AS1Q9UH64 79 aa7.78□□□□□ -1.16
C9orf3-220ENST00000489318 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 IGHV3OR16-9A0A0B4J2B5 98 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 H3BRM9 83 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 DLEU1O43261 78 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 IGHV3-30P01768 117 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 IGHV3-33P01772 117 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 IGHV3-30-3P0DP02 117 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 IGHV3-30-5P0DP03 117 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 SS18Q15532 418 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 PRO1933Q9H354 126 aa7.77□□□□□ -1.17
C9orf3-220ENST00000489318 STARD9Q9P2P6 4700 aa7.76□□□□□ -1.17
C9orf3-220ENST00000489318 IGLV5-39A0A0G2JS06 123 aa7.76□□□□□ -1.17
C9orf3-220ENST00000489318 K7EP13 123 aa7.76□□□□□ -1.17
C9orf3-220ENST00000489318 SIVA1O15304 175 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms