RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 LINC01620Q4KN68 170 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 TRAV12-3A0A0B4J271 114 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 KLLNB2CW77 178 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 ZNF22P17026 224 aaPredicted RBP6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 SORL1Q92673 2214 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 A0A0J9YXV3 536 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 M0R2P5 195 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 IGLV1-51P01701 117 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 NDUFV3P56181 108 aaKnown RBP6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 ZNF56Q15929 161 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
EXOSC1-211ENST00000489158 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 DEFB131AP59861 70 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 SHISA2Q6UWI4 295 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 M0QY20 66 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 RHOHQ15669 191 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 FAM110AQ9BQ89 295 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 MDFICQ9P1T7 246 aa6.56□□□□□ -1.36
EXOSC1-211ENST00000489158 A0A0J9YX75 114 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 TRBV10-2A0A0K0K1G8 114 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 TRIAP1O43715 76 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 C9orf66Q5T8R8 295 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 IGHV3-16A0A0C4DH30 117 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 IFITM1P13164 125 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 C3orf56Q8N813 242 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 SPXQ9BT56 116 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
EXOSC1-211ENST00000489158 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
EXOSC1-211ENST00000489158 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
EXOSC1-211ENST00000489158 H3BMM0 161 aa6.54□□□□□ -1.36
EXOSC1-211ENST00000489158 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
EXOSC1-211ENST00000489158 UBE2WQ96B02 151 aa6.54□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 A8MTW9 85 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 I3L3M4 83 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE7O76087 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 PRSS2P07478 247 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 IGHV3-30-3P0DP02 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 GAGE4Q13068 117 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 WFDC9Q8NEX5 89 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 ATRQ13535 2644 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 H7C423 109 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 LITAFQ99732 161 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 TIMM21Q9BVV7 248 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
EXOSC1-211ENST00000489158 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 NPC2P61916 151 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 BEAN1Q3B7T3 259 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 Q6Q795 121 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 ODF3L2Q3SX64 289 aa6.52□□□□□ -1.37
EXOSC1-211ENST00000489158 WIPF1O43516 503 aa6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 CEMP1Q6PRD7 247 aaPredicted RBP6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 STHQ8IWL8 128 aa6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
EXOSC1-211ENST00000489158 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 A8MZ25 164 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 COX6CP09669 75 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 SPANXCQ9NY87 97 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
EXOSC1-211ENST00000489158 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 H3BT86 120 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 MRPS36P82909 103 aaKnown RBP6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 MIAQ16674 131 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 WFDC10AQ9H1F0 79 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 PYGO1Q9Y3Y4 419 aa6.49□□□□□ -1.37
EXOSC1-211ENST00000489158 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
EXOSC1-211ENST00000489158 NOTCH3Q9UM47 2321 aa6.48□□□□□ -1.37
EXOSC1-211ENST00000489158 RBMY1BA6NDE4 496 aaKnown RBP6.47□□□□□ -1.37
EXOSC1-211ENST00000489158 RBMY1EA6NEQ0 496 aaKnown RBP6.47□□□□□ -1.37
EXOSC1-211ENST00000489158 LST1O00453 97 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms