RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LENEPQ9Y5L5 61 aa1.52□□□□□ -2.17
PRPF4-203ENST00000488937 SCN7AQ01118 1682 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 MROH2BQ7Z745 1585 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 MAGI3Q5TCQ9 1506 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
PRPF4-203ENST00000488937 C10orf142B7Z368 130 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 APOC3P02656 99 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 KLKP1Q107X0 134 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 BRD3OSQ6XYD6 125 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 Q86TA4 180 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 LINC01600Q96MT4 127 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 DYNLRB1Q9NP97 96 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 SNURFQ9Y675 71 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 E9PCH4 1651 aa1.51□□□□□ -2.17
PRPF4-203ENST00000488937 PPRC1Q5VV67 1664 aaKnown RBP1.51□□□□□ -2.17
PRPF4-203ENST00000488937 ERICH3Q5RHP9 1530 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 NLRP1Q9C000 1473 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 NRXN1Q9ULB1 1477 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 MED13LQ71F56 2210 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 UQCRHLA0A096LP55 91 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 TMEM14DPA8MWL7 114 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 CHKB-CPT1BH3BT56 60 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 J3QRE1 110 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 UQCRHP07919 91 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 KRTAP10-10P60014 251 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 S100A13Q99584 98 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 MANBALQ9NQG1 85 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 HIGD1BQ9P298 99 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 EHBP1L1Q8N3D4 1523 aa1.5□□□□□ -2.17
PRPF4-203ENST00000488937 HMGN4O00479 90 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 BCE1O60756 84 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 COX6CP09669 75 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 EDDM3BP56851 147 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
PRPF4-203ENST00000488937 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 NXT2Q9NPJ8 142 aaKnown RBP1.49□□□□□ -2.17
PRPF4-203ENST00000488937 UQCR10Q9UDW1 63 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 ABCC2Q92887 1545 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 MRC1P22897 1456 aa1.49□□□□□ -2.17
PRPF4-203ENST00000488937 PTPN23Q9H3S7 1636 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 ZNF236Q9UL36 1845 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 A0A0G2JND7 137 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 LOC285095A0A1B0GVY8 99 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 IGKV4-1P06312 121 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 CCL18P55774 89 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 ALKAL2Q6UX46 152 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 RGPD2P0DJD1 1756 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 CCDC141Q6ZP82 1450 aa1.48□□□□□ -2.17
PRPF4-203ENST00000488937 EDC4Q6P2E9 1401 aaKnown RBP1.48□□□□□ -2.17
PRPF4-203ENST00000488937 RGPD8O14715 1765 aaPredicted RBP1.47□□□□□ -2.17
PRPF4-203ENST00000488937 RGPD5Q99666 1765 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 NUP188Q5SRE5 1749 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 TRBV25-1A0A075B6N4 114 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 PPP1R17O96001 155 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 SPAG11BQ08648 103 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ETDBQ3ZM63 59 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 SPAG11AQ6PDA7 123 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ZNF720Q7Z2F6 126 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 PPP1R1CQ8WVI7 109 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 AMELXQ99217 191 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 WFDC6Q9BQY6 131 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ST20Q9HBF5 79 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 COL4A1P02462 1669 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ZFHX3Q15911 3703 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 TMEM131LA2VDJ0 1609 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ADCY10Q96PN6 1610 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 ABCA8O94911 1581 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 CFAP74Q9C0B2 1584 aa1.47□□□□□ -2.17
PRPF4-203ENST00000488937 FBN1P35555 2871 aaKnown RBP1.46□□□□□ -2.18
PRPF4-203ENST00000488937 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 CPS1P31327 1500 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.46□□□□□ -2.18
PRPF4-203ENST00000488937 ABCA10Q8WWZ4 1543 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 ZC3H13Q5T200 1668 aaKnown RBP1.46□□□□□ -2.18
PRPF4-203ENST00000488937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
PRPF4-203ENST00000488937 NMSQ5H8A3 153 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 FAM223AQ8IWN6 122 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 ZNF563Q8TA94 476 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 Q96NJ1 140 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 V9GYH0 126 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 V9GYV3 84 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 LTN1O94822 1766 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 KDM3BQ7LBC6 1761 aa1.46□□□□□ -2.18
PRPF4-203ENST00000488937 CUX1P39880 1505 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 CEP350Q5VT06 3117 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 NCOA2Q15596 1464 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 A0A1W2PPM0 123 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 EFNA4P52798 201 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 WFDC2Q14508 124 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 C10orf99Q6UWK7 81 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 CCL19Q99731 98 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 TMEM14BQ9NUH8 114 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 SPCS1Q9Y6A9 102 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 SDK1Q7Z5N4 2213 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 ADAMTS12P58397 1594 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 KCPQ6ZWJ8 1503 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms