RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IGHV1-69P01742 117 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 CCKP06307 115 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 HMGA1P17096 107 aaKnown RBP1.83□□□□□ -2.12
SSR1-209ENST00000488834 LGALS3P17931 250 aaKnown RBP1.83□□□□□ -2.12
SSR1-209ENST00000488834 FXYD7P58549 80 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 FXYD3Q14802 87 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 LINC01554Q52M75 96 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 Q8N2B8 174 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 Q8N8P6 123 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 CNEP1R1Q8N9A8 125 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 WFDC5Q8TCV5 224 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 COL4A2P08572 1712 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 IGKV1OR2-108A0A075B7D4 117 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 IGHV3-73A0A0B4J1V6 119 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 TRBV30A0A0K0K1B3 111 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 TRBV27A0A0K0K1C4 114 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 A0A1W2PQD3 144 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 HIGD1CA8MV81 97 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 TMEM256-PLSCR3K7ERE1 68 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 NDUFC1O43677 76 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 IGHV3-33P01772 117 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 HMGN2P05204 90 aaKnown RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 ARL14EPLP0DKL9 152 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 ZNF22P17026 224 aaPredicted RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 FCER1GP30273 86 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 SNRPD3P62318 126 aaKnown RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 KISS1Q15726 138 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 DEFB134Q4QY38 66 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 Q6JHZ5 121 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 LYPD5Q6UWN5 251 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 C2orf82Q6UX34 121 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 SLC50A1Q9BRV3 221 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 NPCDR1Q9BY65 106 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 XAGE1AQ9HD64 81 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 TMEM167BQ9NRX6 74 aa1.82□□□□□ -2.12
SSR1-209ENST00000488834 DIDO1Q9BTC0 2240 aaKnown RBP1.82□□□□□ -2.12
SSR1-209ENST00000488834 COL4A6Q14031 1691 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 PRR14LQ5THK1 2151 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 A0A1W2PNN7 141 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 H7BZZ5 65 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 K7EMI3 77 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 TIMM17BO60830 172 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 PIRTP0C851 137 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 CCL5P13501 91 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 XCL1P47992 114 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 FXYD4P59646 89 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 SPANXN5Q5MJ07 72 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 SMCR5Q8TEV8 140 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 ZNF714Q96N38 554 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 NABP2Q9BQ15 211 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 ALPK2Q86TB3 2170 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 DOCK10Q96BY6 2186 aa1.81□□□□□ -2.12
SSR1-209ENST00000488834 TNRC6BQ9UPQ9 1833 aaKnown RBP1.8□□□□□ -2.12
SSR1-209ENST00000488834 IGKV1D-37A0A075B6S9 117 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 TRAV3A0A0B4J244 114 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 TRAV12-1A0A0B4J245 112 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 IGKV1-9A0A0C4DH69 117 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 FAM223BA6NKX1 122 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 IQCF6A8MYZ5 107 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 H3BSH0 61 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 IGKV1-16P04430 117 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 IAPPP10997 89 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 CKS2P33552 79 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 UBE2BP63146 152 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 TFF3Q07654 80 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 SS18Q15532 418 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 RHOHQ15669 191 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 Q1T7F1 81 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 TMEM263Q8WUH6 116 aaKnown RBP1.8□□□□□ -2.12
SSR1-209ENST00000488834 LINC00474Q9P2X8 69 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 ARFGEF3Q5TH69 2177 aa1.8□□□□□ -2.12
SSR1-209ENST00000488834 TRAV7A0A075B6U4 112 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 IGLV3-32A0A0A0MS00 114 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.79□□□□□ -2.12
SSR1-209ENST00000488834 TRAV13-2A0A0B4J235 113 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 A0A0J9YY99 117 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 TRBV6-1A0A0K0K1D8 114 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 A0A1B0GUT8 65 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 H3BQ85 93 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 M0R135 149 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 IGHV3-53P01767 116 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 IGHV3-30P01768 117 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 IGHV3-30-5P0DP03 117 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 COX6B1P14854 86 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 PLNP26678 52 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 RNASE4P34096 147 aaKnown RBP1.79□□□□□ -2.12
SSR1-209ENST00000488834 EDDM3BP56851 147 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 RBM3P98179 157 aaKnown RBP1.79□□□□□ -2.12
SSR1-209ENST00000488834 MIAQ16674 131 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.79□□□□□ -2.12
SSR1-209ENST00000488834 ZNF818PQ6ZRF7 136 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 MIR17HGQ75NE6 70 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms