RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 Q8N8P6 123 aa11.32□□□□□ -0.6
SHROOM1-205ENST00000488072 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
SHROOM1-205ENST00000488072 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
SHROOM1-205ENST00000488072 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
SHROOM1-205ENST00000488072 H7C423 109 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 Q0VG73 95 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 OR5A1Q8NGJ0 315 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
SHROOM1-205ENST00000488072 MIAQ16674 131 aa11.3□□□□□ -0.6
SHROOM1-205ENST00000488072 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
SHROOM1-205ENST00000488072 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
SHROOM1-205ENST00000488072 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
SHROOM1-205ENST00000488072 RAB5AP20339 215 aa11.28□□□□□ -0.6
SHROOM1-205ENST00000488072 COX19Q49B96 90 aa11.28□□□□□ -0.6
SHROOM1-205ENST00000488072 Q8N814 137 aa11.28□□□□□ -0.6
SHROOM1-205ENST00000488072 RMI2Q96E14 147 aa11.28□□□□□ -0.6
SHROOM1-205ENST00000488072 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
SHROOM1-205ENST00000488072 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
SHROOM1-205ENST00000488072 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
SHROOM1-205ENST00000488072 MT-ND6P03923 174 aa11.27□□□□□ -0.61
SHROOM1-205ENST00000488072 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.61
SHROOM1-205ENST00000488072 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
SHROOM1-205ENST00000488072 LINC00959A0A1B0GUT2 108 aa11.26□□□□□ -0.61
SHROOM1-205ENST00000488072 C16orf90A8MZG2 172 aa11.26□□□□□ -0.61
SHROOM1-205ENST00000488072 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
SHROOM1-205ENST00000488072 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
SHROOM1-205ENST00000488072 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
SHROOM1-205ENST00000488072 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
SHROOM1-205ENST00000488072 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
SHROOM1-205ENST00000488072 DNAH8Q96JB1 4490 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 COLCA2A8K830 154 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 XCL1P47992 114 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 LINC01620Q4KN68 170 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
SHROOM1-205ENST00000488072 TRAV13-1A0A0B4J241 112 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 EREGO14944 169 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 CCL25O15444 150 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 TIMM21Q9BVV7 248 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 NXT2Q9NPJ8 142 aaKnown RBP11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 COX11Q9Y6N1 276 aa11.23□□□□□ -0.61
SHROOM1-205ENST00000488072 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 IGLV4-3A0A075B6K6 122 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 PRSS1P07477 247 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 FOXI1Q12951 378 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 CSDC2Q9Y534 153 aaKnown RBP11.22□□□□□ -0.61
SHROOM1-205ENST00000488072 TRGC2P03986 189 aa11.21□□□□□ -0.61
SHROOM1-205ENST00000488072 ORMDL2Q53FV1 153 aa11.21□□□□□ -0.61
SHROOM1-205ENST00000488072 SPANXA1Q9NS26 97 aa11.21□□□□□ -0.61
SHROOM1-205ENST00000488072 IGLV5-52A0A0A0MRZ9 124 aa11.2□□□□□ -0.62
SHROOM1-205ENST00000488072 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
SHROOM1-205ENST00000488072 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
SHROOM1-205ENST00000488072 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
SHROOM1-205ENST00000488072 A0A096LNJ9 63 aa11.18□□□□□ -0.62
SHROOM1-205ENST00000488072 SLPIP03973 132 aa11.18□□□□□ -0.62
SHROOM1-205ENST00000488072 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
SHROOM1-205ENST00000488072 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
SHROOM1-205ENST00000488072 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
SHROOM1-205ENST00000488072 HAMPP81172 84 aa11.17□□□□□ -0.62
SHROOM1-205ENST00000488072 SS18Q15532 418 aa11.17□□□□□ -0.62
SHROOM1-205ENST00000488072 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
SHROOM1-205ENST00000488072 PYGO1Q9Y3Y4 419 aa11.17□□□□□ -0.62
SHROOM1-205ENST00000488072 IFITM10A6NMD0 228 aa11.16□□□□□ -0.62
SHROOM1-205ENST00000488072 COX6A2Q02221 97 aa11.16□□□□□ -0.62
SHROOM1-205ENST00000488072 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
SHROOM1-205ENST00000488072 HSPG2P98160 4391 aa11.15□□□□□ -0.62
SHROOM1-205ENST00000488072 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
SHROOM1-205ENST00000488072 GCSHP23434 173 aa11.15□□□□□ -0.62
SHROOM1-205ENST00000488072 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
SHROOM1-205ENST00000488072 RYR1P21817 5038 aa11.15□□□□□ -0.63
SHROOM1-205ENST00000488072 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 K7EMI3 77 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 LINC00614P0C842 121 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 CD164L2Q6UWJ8 174 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
SHROOM1-205ENST00000488072 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
SHROOM1-205ENST00000488072 LINC00310P59036 64 aa11.13□□□□□ -0.63
SHROOM1-205ENST00000488072 AMELXQ99217 191 aa11.13□□□□□ -0.63
SHROOM1-205ENST00000488072 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
SHROOM1-205ENST00000488072 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
SHROOM1-205ENST00000488072 AP5S1Q9NUS5 200 aa11.12□□□□□ -0.63
SHROOM1-205ENST00000488072 HERC2O95714 4834 aa11.12□□□□□ -0.63
SHROOM1-205ENST00000488072 NUPR1O60356 82 aa11.11□□□□□ -0.63
SHROOM1-205ENST00000488072 UBE2D1P51668 147 aa11.11□□□□□ -0.63
SHROOM1-205ENST00000488072 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
SHROOM1-205ENST00000488072 VCX2Q9H322 139 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms