RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 WT1-ASQ06250 92 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST2H2BEQ16778 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 CCDC58Q4VC31 144 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST2H2BFQ5QNW6 126 aaPredicted RBP2□□□□□ -2.09
PRPF38A-203ENST00000487160 RPL22L1Q6P5R6 122 aaKnown RBP2□□□□□ -2.09
PRPF38A-203ENST00000487160 TOMM20LQ6UXN7 152 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 SMIM20Q8N5G0 67 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 DCANP1Q8TF63 244 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 MAFIPQ8WZ33 124 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BHQ93079 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BNQ99877 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BMQ99879 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 GINS4Q9BRT9 223 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 GINS3Q9BRX5 216 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV9-1A0A075B6T8 112 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV4A0A0B4J268 109 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 PNMA8CA0A1B0GUJ8 204 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 TMEM14DPA8MWL7 114 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 GNG7O60262 68 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 IFNA1P01562 189 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 UCHL1P09936 223 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 UBBP0CG47 229 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 HLA-DRB4P13762 266 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 SRIP30626 198 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 ATP5G3P48201 142 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 DEFB1P60022 68 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 RAB14P61106 215 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 ZNF90Q03938 601 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 ESRGQ1W209 222 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 RRN3P1Q2M238 152 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 GDF5OSQ5U4N7 250 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 Q6Q795 121 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 ARHGAP5-AS1Q96IT6 56 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 FAM107BQ9H098 131 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 LPAR5Q9H1C0 372 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 SLC35B3Q9H1N7 401 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 BET1LQ9NYM9 111 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 TAS2R8Q9NYW2 309 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 PRNDQ9UKY0 176 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 HLA-DRB4X5D2U9 266 aa1.99□□□□□ -2.09
PRPF38A-203ENST00000487160 A0A0J9YY99 117 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TCRBV3S1A0A5B6 114 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 FABP5P3A8MUU1 101 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 I3L2K1 104 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAPPC2P0DI81 140 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAPPC2BP0DI82 140 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 MT1HL1P0DM35 61 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 NFYAP23511 347 aaPredicted RBP1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 SNRPD3P62318 126 aaKnown RBP1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 QRFPP83859 136 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 EXOC3-AS1Q8N2X6 119 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TERB2Q8NHR7 220 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 LSM10Q969L4 123 aaKnown RBP1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 SS18L2Q9UHA2 77 aa1.98□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV7A0A075B6U4 112 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 J3QQQ9 107 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 ATG12O94817 140 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 EIF2B2P49770 351 aaKnown RBP1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 INSL4Q14641 139 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 LELP1Q5T871 98 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 Q6ZSA8 131 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 OR4B1Q8NGF8 309 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 CCDC90BQ9GZT6 254 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 NDUFA4L2Q9NRX3 87 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 NAT8Q9UHE5 227 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 HHLA3Q9XRX5 114 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
PRPF38A-203ENST00000487160 A0A096LPF7 62 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 SUPT4H1P63272 117 aaKnown RBP1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 ERHP84090 104 aaKnown RBP1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 PSG9Q00887 426 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 LYZL1Q6UWQ5 148 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 FOXI2Q6ZQN5 318 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 LCA10Q71F78 164 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 Q8N814 137 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 GPR146Q96CH1 333 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 C2orf50Q96LR7 162 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 TIMM21Q9BVV7 248 aa1.96□□□□□ -2.1
PRPF38A-203ENST00000487160 TRBV19A0A075B6N1 114 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 A0A1B0GVG6 124 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 M0R2Z0 102 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 HMGB3O15347 200 aaKnown RBP1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 HTN1P15515 57 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 HIST1H1DP16402 221 aaKnown RBP1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 HIST1H4AP62805 103 aaKnown RBP1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 GNG5P63218 68 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 CATR1Q13166 79 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 SPINK13Q1W4C9 94 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 Q6ZTI0 123 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 LINC00052Q96N35 136 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 NOP10Q9NPE3 64 aaKnown RBP1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 MRPL36Q9P0J6 103 aaKnown RBP1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 LY96Q9Y6Y9 160 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 FAT4Q6V0I7 4981 aa1.95□□□□□ -2.1
PRPF38A-203ENST00000487160 TNXBP22105 4242 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms