RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 LHBP01229 141 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 IGKV1D-12P01611 117 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 IGLV3-19P01714 112 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
COPS3-209ENST00000486810 MOBPQ13875 183 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 PDE6HQ13956 83 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 PIGYQ3MUY2 71 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 LYPD1Q8N2G4 141 aa3.68□□□□□ -1.82
COPS3-209ENST00000486810 IGHV3OR16-13A0A075B7E8 117 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 TRAV10A0A0B4J240 114 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 CRIP1P50238 77 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 TSPEAR-AS2P59090 65 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 C10orf113Q5VZT2 155 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 Q6ZS52 159 aa3.67□□□□□ -1.82
COPS3-209ENST00000486810 TNRC6BQ9UPQ9 1833 aaKnown RBP3.67□□□□□ -1.82
COPS3-209ENST00000486810 LCE6AA0A183 80 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 PINLYPA6NC86 204 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 A8MU10 97 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 H0YGX0 51 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 CTSGP08311 255 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 PI4KAP42356 2102 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 NREPQ16612 68 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 C2orf83Q53S99 150 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 C17orf82Q86X59 251 aaPredicted RBP3.66□□□□□ -1.82
COPS3-209ENST00000486810 Q8N377 158 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 SMIM2Q9BVW6 85 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 MRPL36Q9P0J6 103 aaKnown RBP3.66□□□□□ -1.82
COPS3-209ENST00000486810 MUC22E2RYF6 1773 aaPredicted RBP3.66□□□□□ -1.82
COPS3-209ENST00000486810 SPAG17Q6Q759 2223 aa3.66□□□□□ -1.82
COPS3-209ENST00000486810 COL4A1P02462 1669 aa3.65□□□□□ -1.82
COPS3-209ENST00000486810 BSPH1Q075Z2 132 aa3.65□□□□□ -1.83
COPS3-209ENST00000486810 MUC4Q99102 2169 aa3.65□□□□□ -1.83
COPS3-209ENST00000486810 IGKV1OR2-108A0A075B7D4 117 aa3.64□□□□□ -1.83
COPS3-209ENST00000486810 SAA2P0DJI9 122 aaPredicted RBP3.64□□□□□ -1.83
COPS3-209ENST00000486810 ZNF32P17041 273 aa3.64□□□□□ -1.83
COPS3-209ENST00000486810 IGLV3-21P80748 117 aaPredicted RBP3.64□□□□□ -1.83
COPS3-209ENST00000486810 SPINK14Q6IE38 97 aa3.64□□□□□ -1.83
COPS3-209ENST00000486810 C2orf66Q6UXQ4 117 aa3.64□□□□□ -1.83
COPS3-209ENST00000486810 ZNF625Q96I27 306 aaPredicted RBP3.64□□□□□ -1.83
COPS3-209ENST00000486810 C14orf132Q9NPU4 83 aa3.64□□□□□ -1.83
COPS3-209ENST00000486810 DOCK10Q96BY6 2186 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 IGHV3-20A0A0C4DH32 117 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 IGLV1-51P01701 117 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 IGHV1-69P01742 117 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 CCL5P13501 91 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 C10orf128Q5T292 105 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 CELA1Q9UNI1 258 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 PRR14LQ5THK1 2151 aa3.63□□□□□ -1.83
COPS3-209ENST00000486810 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 A6NED7 52 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 LY6HO94772 140 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 IGHV3-43DP0DP04 118 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 PDE6GP18545 87 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 HCP5Q6MZN7 132 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 RETNLBQ9BQ08 111 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 Q9BRP9 147 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 S4R3C0 116 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 ALPK2Q86TB3 2170 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 UNC13CQ8NB66 2214 aa3.62□□□□□ -1.83
COPS3-209ENST00000486810 ZGRF1Q86YA3 2104 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 IGHV3-72A0A0B4J1Y9 119 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 SRRM5B3KS81 715 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 K7EQD1 137 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 BPY2O14599 106 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 NDUFB1O75438 58 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 LY6G6DO95868 133 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 FAM74A4Q5TZK3 123 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 Q8N814 137 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 WFDC9Q8NEX5 89 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 ZCCHC13Q8WW36 166 aaKnown RBP3.61□□□□□ -1.83
COPS3-209ENST00000486810 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 COL4A5P29400 1685 aa3.61□□□□□ -1.83
COPS3-209ENST00000486810 KNTC1P50748 2209 aa3.6□□□□□ -1.83
COPS3-209ENST00000486810 SPINK9Q5DT21 86 aa3.6□□□□□ -1.83
COPS3-209ENST00000486810 B9D2Q9BPU9 175 aa3.6□□□□□ -1.83
COPS3-209ENST00000486810 LINC00467Q9BRT7 94 aa3.6□□□□□ -1.83
COPS3-209ENST00000486810 ORMDL1Q9P0S3 153 aa3.6□□□□□ -1.83
COPS3-209ENST00000486810 DNAJC13O75165 2243 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 IGHV3OR16-12A0A075B7B8 117 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 B4DSR2 109 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 H3BQ85 93 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 PRCDQ00LT1 54 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
COPS3-209ENST00000486810 USF3Q68DE3 2245 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 IGKV1D-37A0A075B6S9 117 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 TRBV6-5A0A0K0K1A5 114 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 LRCOL1A6NCL2 159 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3-30-3P0DP02 117 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
COPS3-209ENST00000486810 REG3AQ06141 175 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 790.6 ms