RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 IGHV4-4A0A075B6R2 117 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 LY6G6DO95868 133 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 LINC00467Q9BRT7 94 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 SS18Q15532 418 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 LEPROTO15243 131 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 A8MZ25 164 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 SLC25A20O43772 301 aa9.73□□□□□ -0.85
HMGN1-216ENST00000486741 HERVK_113P63121 156 aa9.72□□□□□ -0.85
HMGN1-216ENST00000486741 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
HMGN1-216ENST00000486741 HIGD1BQ9P298 99 aa9.72□□□□□ -0.85
HMGN1-216ENST00000486741 RS1O15537 224 aa9.72□□□□□ -0.85
HMGN1-216ENST00000486741 MT-ATP8P03928 68 aa9.72□□□□□ -0.85
HMGN1-216ENST00000486741 POLR2KP53803 58 aaKnown RBP9.72□□□□□ -0.85
HMGN1-216ENST00000486741 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
HMGN1-216ENST00000486741 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.85
HMGN1-216ENST00000486741 APOC4P55056 127 aa9.71□□□□□ -0.85
HMGN1-216ENST00000486741 FOXI1Q12951 378 aa9.71□□□□□ -0.85
HMGN1-216ENST00000486741 ATXN8Q156A1 80 aa9.71□□□□□ -0.85
HMGN1-216ENST00000486741 C9orf85Q96MD7 179 aa9.71□□□□□ -0.85
HMGN1-216ENST00000486741 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.86
HMGN1-216ENST00000486741 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 TRBV27A0A0K0K1C4 114 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
HMGN1-216ENST00000486741 MUC4Q99102 2169 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 CHD6Q8TD26 2715 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 C9orf66Q5T8R8 295 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 MRAPQ8TCY5 172 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
HMGN1-216ENST00000486741 ITPR1Q14643 2758 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 TSHBP01222 138 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 CFC1P0CG37 223 aa9.69□□□□□ -0.86
HMGN1-216ENST00000486741 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 GAGE2AQ6NT46 116 aa9.68□□□□□ -0.86
HMGN1-216ENST00000486741 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
HMGN1-216ENST00000486741 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
HMGN1-216ENST00000486741 RBMY1BA6NDE4 496 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 RBMY1EA6NEQ0 496 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 RBMY1DP0C7P1 496 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 RBMY1A1P0DJD3 496 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 RBMY1CP0DJD4 496 aa9.68□□□□□ -0.86
HMGN1-216ENST00000486741 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 ZNF22P17026 224 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-216ENST00000486741 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
HMGN1-216ENST00000486741 VSIG2Q96IQ7 327 aa9.67□□□□□ -0.86
HMGN1-216ENST00000486741 S100A7L2Q5SY68 101 aa9.66□□□□□ -0.86
HMGN1-216ENST00000486741 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
HMGN1-216ENST00000486741 BRI3O95415 125 aa9.65□□□□□ -0.86
HMGN1-216ENST00000486741 HILS1P60008 231 aa9.65□□□□□ -0.86
HMGN1-216ENST00000486741 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
HMGN1-216ENST00000486741 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.86
HMGN1-216ENST00000486741 TRBV6-5A0A0K0K1A5 114 aa9.65□□□□□ -0.86
HMGN1-216ENST00000486741 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.87
HMGN1-216ENST00000486741 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.87
HMGN1-216ENST00000486741 SPANXB1Q9NS25 103 aaPredicted RBP9.65□□□□□ -0.87
HMGN1-216ENST00000486741 NDUFA7O95182 113 aa9.64□□□□□ -0.87
HMGN1-216ENST00000486741 INSL3P51460 131 aa9.64□□□□□ -0.87
HMGN1-216ENST00000486741 RBMY1FQ15415 496 aaKnown RBP9.64□□□□□ -0.87
HMGN1-216ENST00000486741 Q6ZSN1 163 aa9.64□□□□□ -0.87
HMGN1-216ENST00000486741 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
HMGN1-216ENST00000486741 ANKRD29Q8N6D5 301 aa9.63□□□□□ -0.87
HMGN1-216ENST00000486741 NFE4Q86UQ8 179 aa9.63□□□□□ -0.87
HMGN1-216ENST00000486741 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 DPH3Q96FX2 82 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 Q9UF83 564 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 NDUFA11Q86Y39 141 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 ZANQ9Y493 2812 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 TRBV10-1A0A0K0K1A3 114 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 ATP5G1P05496 136 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 C1orf158Q8N1D5 194 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
HMGN1-216ENST00000486741 SPART-AS1P0CW21 52 aa9.61□□□□□ -0.87
HMGN1-216ENST00000486741 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
HMGN1-216ENST00000486741 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
HMGN1-216ENST00000486741 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
HMGN1-216ENST00000486741 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
HMGN1-216ENST00000486741 CARD19Q96LW7 228 aa9.6□□□□□ -0.87
HMGN1-216ENST00000486741 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
HMGN1-216ENST00000486741 CRYBG3Q68DQ2 2970 aa9.6□□□□□ -0.87
HMGN1-216ENST00000486741 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
HMGN1-216ENST00000486741 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
HMGN1-216ENST00000486741 Q9HAA7 133 aa9.59□□□□□ -0.87
HMGN1-216ENST00000486741 MAST4O15021 2626 aa9.59□□□□□ -0.87
HMGN1-216ENST00000486741 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms