RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 DYNLRB2Q8TF09 96 aa12.71□□□□□ -0.37
TNXB-205ENST00000486148 A0A0J9YXY3 114 aa12.71□□□□□ -0.38
TNXB-205ENST00000486148 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.7□□□□□ -0.38
TNXB-205ENST00000486148 IGKV2-29A2NJV5 120 aaPredicted RBP12.7□□□□□ -0.38
TNXB-205ENST00000486148 DEFB114Q30KQ6 69 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 DEFB113Q30KQ7 82 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 ATXN8Q156A1 80 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 Q96MF0 132 aa12.7□□□□□ -0.38
TNXB-205ENST00000486148 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
TNXB-205ENST00000486148 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
TNXB-205ENST00000486148 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
TNXB-205ENST00000486148 ZNF469Q96JG9 3925 aaPredicted RBP12.69□□□□□ -0.38
TNXB-205ENST00000486148 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
TNXB-205ENST00000486148 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
TNXB-205ENST00000486148 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
TNXB-205ENST00000486148 A0A0B4J2C4 111 aa12.68□□□□□ -0.38
TNXB-205ENST00000486148 Q1RN00 199 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 LITAFQ99732 161 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 A8MZ25 164 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 TLN2Q9Y4G6 2542 aa12.67□□□□□ -0.38
TNXB-205ENST00000486148 INSP01308 110 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 AKAP9Q99996 3911 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 IGHV1-58A0A0C4DH39 117 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 TRIAP1O43715 76 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 CHD6Q8TD26 2715 aa12.66□□□□□ -0.38
TNXB-205ENST00000486148 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
TNXB-205ENST00000486148 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
TNXB-205ENST00000486148 RS1O15537 224 aa12.65□□□□□ -0.39
TNXB-205ENST00000486148 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.39
TNXB-205ENST00000486148 ADAMTSL4-AS1Q5T5F5 129 aa12.65□□□□□ -0.39
TNXB-205ENST00000486148 KRTAP1-3Q8IUG1 177 aa12.65□□□□□ -0.39
TNXB-205ENST00000486148 EPG5Q9HCE0 2579 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 Q6ZSV7 163 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 VSIG2Q96IQ7 327 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 TMEM126AQ9H061 195 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 H7C423 109 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 ZNF843Q8N446 348 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 C11orf44Q8N8P7 122 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 NDUFA12Q9UI09 145 aa12.64□□□□□ -0.39
TNXB-205ENST00000486148 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
TNXB-205ENST00000486148 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.63□□□□□ -0.39
TNXB-205ENST00000486148 LRRC75A-AS1Q8N1F1 130 aa12.63□□□□□ -0.39
TNXB-205ENST00000486148 DNAJC30Q96LL9 226 aa12.63□□□□□ -0.39
TNXB-205ENST00000486148 MRPL23Q16540 153 aaKnown RBP12.62□□□□□ -0.39
TNXB-205ENST00000486148 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
TNXB-205ENST00000486148 PRSS2P07478 247 aa12.62□□□□□ -0.39
TNXB-205ENST00000486148 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
TNXB-205ENST00000486148 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
TNXB-205ENST00000486148 C1orf158Q8N1D5 194 aa12.61□□□□□ -0.39
TNXB-205ENST00000486148 TRBV7-7A0A0K0K1E9 115 aa12.61□□□□□ -0.39
TNXB-205ENST00000486148 APCP25054 2843 aa12.6□□□□□ -0.39
TNXB-205ENST00000486148 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
TNXB-205ENST00000486148 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
TNXB-205ENST00000486148 NPC2P61916 151 aa12.59□□□□□ -0.39
TNXB-205ENST00000486148 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
TNXB-205ENST00000486148 CDKN2A-AS1Q9UH64 79 aa12.59□□□□□ -0.39
TNXB-205ENST00000486148 STHQ8IWL8 128 aa12.59□□□□□ -0.39
TNXB-205ENST00000486148 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
TNXB-205ENST00000486148 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
TNXB-205ENST00000486148 ITPR3Q14573 2671 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 NF1P21359 2839 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 FAM236AA0A1B0GUQ0 79 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 FAM236BA0A1B0GV22 79 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 IL17DQ8TAD2 202 aa12.58□□□□□ -0.4
TNXB-205ENST00000486148 CSDC2Q9Y534 153 aaKnown RBP12.58□□□□□ -0.4
TNXB-205ENST00000486148 FAM240AA0A1B0GVK7 77 aa12.57□□□□□ -0.4
TNXB-205ENST00000486148 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
TNXB-205ENST00000486148 MIAQ16674 131 aa12.57□□□□□ -0.4
TNXB-205ENST00000486148 CLEC2BQ92478 149 aa12.57□□□□□ -0.4
TNXB-205ENST00000486148 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
TNXB-205ENST00000486148 LOC107984640A0A0U1RRK4 108 aa12.56□□□□□ -0.4
TNXB-205ENST00000486148 COX6A2Q02221 97 aa12.56□□□□□ -0.4
TNXB-205ENST00000486148 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
TNXB-205ENST00000486148 H3BT86 120 aa12.56□□□□□ -0.4
TNXB-205ENST00000486148 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
TNXB-205ENST00000486148 DGAT2L7PQ6IED9 249 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 WFDC11Q8NEX6 87 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 TMEM101Q96IK0 257 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 IGLV5-45A0A087WSX0 123 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 CCL24O00175 119 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 TIRAPP58753 221 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 Q6ZTI0 123 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 DAND5Q8N907 189 aa12.55□□□□□ -0.4
TNXB-205ENST00000486148 NDUFA7O95182 113 aa12.54□□□□□ -0.4
TNXB-205ENST00000486148 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
TNXB-205ENST00000486148 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
TNXB-205ENST00000486148 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.41
TNXB-205ENST00000486148 C9orf153Q5TBE3 101 aa12.52□□□□□ -0.41
TNXB-205ENST00000486148 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms