RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
RPUSD3-217ENST00000485705 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
RPUSD3-217ENST00000485705 CDC42SE2Q9NRR3 84 aa10.31□□□□□ -0.76
RPUSD3-217ENST00000485705 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 MIAQ16674 131 aa10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 HECTD4Q9Y4D8 3996 aa10.3□□□□□ -0.76
RPUSD3-217ENST00000485705 DYNC1H1Q14204 4646 aaKnown RBP10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 K7EMI3 77 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 PSCAO43653 123 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 ORMDL2Q53FV1 153 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 DGAT2L7PQ6IED9 249 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 Q6ZUT4 128 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 TM2D2Q9BX73 214 aa10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
RPUSD3-217ENST00000485705 A0A1B0GVY2 172 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 RMI2Q96E14 147 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
RPUSD3-217ENST00000485705 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
RPUSD3-217ENST00000485705 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.77
RPUSD3-217ENST00000485705 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
RPUSD3-217ENST00000485705 CYSLTR1Q9Y271 337 aa10.27□□□□□ -0.77
RPUSD3-217ENST00000485705 A0A087WTM6 91 aa10.26□□□□□ -0.77
RPUSD3-217ENST00000485705 LRCOL1A6NCL2 159 aa10.26□□□□□ -0.77
RPUSD3-217ENST00000485705 WFDC2Q14508 124 aa10.26□□□□□ -0.77
RPUSD3-217ENST00000485705 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
RPUSD3-217ENST00000485705 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
RPUSD3-217ENST00000485705 LECT2O14960 151 aa10.25□□□□□ -0.77
RPUSD3-217ENST00000485705 LINC00614P0C842 121 aa10.25□□□□□ -0.77
RPUSD3-217ENST00000485705 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
RPUSD3-217ENST00000485705 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 TOMM6Q96B49 74 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 AP5S1Q9NUS5 200 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 RYR1P21817 5038 aa10.24□□□□□ -0.77
RPUSD3-217ENST00000485705 A0A096LNJ9 63 aa10.23□□□□□ -0.77
RPUSD3-217ENST00000485705 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
RPUSD3-217ENST00000485705 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
RPUSD3-217ENST00000485705 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
RPUSD3-217ENST00000485705 ZC2HC1BQ5TFG8 222 aa10.23□□□□□ -0.77
RPUSD3-217ENST00000485705 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
RPUSD3-217ENST00000485705 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
RPUSD3-217ENST00000485705 CCL25O15444 150 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 G0S2P27469 103 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 XCL1P47992 114 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 KRTAP10-2P60368 255 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 RAB5BP61020 215 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
RPUSD3-217ENST00000485705 HERC2O95714 4834 aa10.21□□□□□ -0.78
RPUSD3-217ENST00000485705 SS18Q15532 418 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 BAGE3Q86Y29 109 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 SCGB3A1Q96QR1 104 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
RPUSD3-217ENST00000485705 IFITM10A6NMD0 228 aa10.19□□□□□ -0.78
RPUSD3-217ENST00000485705 LINC00310P59036 64 aa10.19□□□□□ -0.78
RPUSD3-217ENST00000485705 FOXI1Q12951 378 aa10.19□□□□□ -0.78
RPUSD3-217ENST00000485705 ERASQ7Z444 233 aa10.19□□□□□ -0.78
RPUSD3-217ENST00000485705 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
RPUSD3-217ENST00000485705 USP17L23D6RBM5 183 aa10.18□□□□□ -0.78
RPUSD3-217ENST00000485705 EREGO14944 169 aa10.18□□□□□ -0.78
RPUSD3-217ENST00000485705 Q8N814 137 aa10.18□□□□□ -0.78
RPUSD3-217ENST00000485705 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
RPUSD3-217ENST00000485705 AMELXQ99217 191 aa10.18□□□□□ -0.78
RPUSD3-217ENST00000485705 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 SERF1AO75920 110 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 HBDP02042 147 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 Q6ZN92 141 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 VCX2Q9H322 139 aa10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 TMA7Q9Y2S6 64 aaKnown RBP10.17□□□□□ -0.78
RPUSD3-217ENST00000485705 NUPR1O60356 82 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 NPSP0C0P6 89 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 PDZD11Q5EBL8 140 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 CD164L2Q6UWJ8 174 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 FAM19A2Q8N3H0 131 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms