RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
CCDC78-214ENST00000485091 VCX2Q9H322 139 aa11.98□□□□□ -0.49
CCDC78-214ENST00000485091 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
CCDC78-214ENST00000485091 APLNQ9ULZ1 77 aa11.97□□□□□ -0.49
CCDC78-214ENST00000485091 PRSS29PA6NIE9 313 aa11.97□□□□□ -0.49
CCDC78-214ENST00000485091 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
CCDC78-214ENST00000485091 PMVKQ15126 192 aa11.97□□□□□ -0.49
CCDC78-214ENST00000485091 A0A087WX48 190 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 CCL18P55774 89 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 RBX1P62877 108 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 LINC00588Q9Y4M8 146 aa11.96□□□□□ -0.49
CCDC78-214ENST00000485091 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
CCDC78-214ENST00000485091 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-214ENST00000485091 PAPPA-AS1Q5QFB9 102 aa11.95□□□□□ -0.5
CCDC78-214ENST00000485091 ATOH7Q8N100 152 aa11.95□□□□□ -0.5
CCDC78-214ENST00000485091 CST9LQ9H4G1 147 aa11.95□□□□□ -0.5
CCDC78-214ENST00000485091 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
CCDC78-214ENST00000485091 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 C20orf202A1L168 122 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
CCDC78-214ENST00000485091 ODF1Q14990 250 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
CCDC78-214ENST00000485091 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 LINC01545Q5VT33 79 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 CDPF1Q6NVV7 123 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 MUC7Q8TAX7 377 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 AMELXQ99217 191 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 MRPL35Q9NZE8 188 aaKnown RBP11.94□□□□□ -0.5
CCDC78-214ENST00000485091 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
CCDC78-214ENST00000485091 NPSP0C0P6 89 aa11.93□□□□□ -0.5
CCDC78-214ENST00000485091 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
CCDC78-214ENST00000485091 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
CCDC78-214ENST00000485091 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
CCDC78-214ENST00000485091 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
CCDC78-214ENST00000485091 STARD9Q9P2P6 4700 aa11.91□□□□□ -0.5
CCDC78-214ENST00000485091 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
CCDC78-214ENST00000485091 PKIAP61925 76 aa11.91□□□□□ -0.5
CCDC78-214ENST00000485091 UBE2DNLQ8IWF7 75 aa11.91□□□□□ -0.5
CCDC78-214ENST00000485091 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
CCDC78-214ENST00000485091 F8VRH5 84 aa11.9□□□□□ -0.5
CCDC78-214ENST00000485091 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
CCDC78-214ENST00000485091 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
CCDC78-214ENST00000485091 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
CCDC78-214ENST00000485091 PLECQ15149 4684 aaKnown RBP11.89□□□□□ -0.51
CCDC78-214ENST00000485091 IGLV4-69A0A075B6H9 119 aa11.88□□□□□ -0.51
CCDC78-214ENST00000485091 DPM2O94777 84 aa11.88□□□□□ -0.51
CCDC78-214ENST00000485091 IGKCP01834 107 aa11.88□□□□□ -0.51
CCDC78-214ENST00000485091 SMIM6P0DI80 62 aa11.88□□□□□ -0.51
CCDC78-214ENST00000485091 SIVA1O15304 175 aa11.87□□□□□ -0.51
CCDC78-214ENST00000485091 UBE2D1P51668 147 aa11.87□□□□□ -0.51
CCDC78-214ENST00000485091 TCTAP57738 103 aa11.87□□□□□ -0.51
CCDC78-214ENST00000485091 C11orf86A6NJI1 115 aa11.86□□□□□ -0.51
CCDC78-214ENST00000485091 MAJINQ3KP22 176 aa11.86□□□□□ -0.51
CCDC78-214ENST00000485091 REG3AQ06141 175 aa11.86□□□□□ -0.51
CCDC78-214ENST00000485091 C12orf57Q99622 126 aa11.86□□□□□ -0.51
CCDC78-214ENST00000485091 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
CCDC78-214ENST00000485091 LYSTQ99698 3801 aa11.85□□□□□ -0.51
CCDC78-214ENST00000485091 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
CCDC78-214ENST00000485091 PLNP26678 52 aa11.85□□□□□ -0.51
CCDC78-214ENST00000485091 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
CCDC78-214ENST00000485091 UPK3BQ9BT76 320 aa11.85□□□□□ -0.51
CCDC78-214ENST00000485091 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
CCDC78-214ENST00000485091 COX6A2Q02221 97 aa11.84□□□□□ -0.51
CCDC78-214ENST00000485091 Q9H8V8 135 aa11.84□□□□□ -0.51
CCDC78-214ENST00000485091 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 LINC00518Q8N0U6 118 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 STPG4Q8N801 248 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 UBE2WQ96B02 151 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
CCDC78-214ENST00000485091 IGLV10-54A0A075B6I4 117 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 CRPP02741 224 aa11.83□□□□□ -0.52
CCDC78-214ENST00000485091 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 SS18Q15532 418 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 VAMP8Q9BV40 100 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 PAM16Q9Y3D7 125 aa11.82□□□□□ -0.52
CCDC78-214ENST00000485091 TRAV9-2A0A087WT02 112 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 CCL25O15444 150 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
CCDC78-214ENST00000485091 XCL1P47992 114 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 S100A12P80511 92 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 HSBP1L1C9JCN9 74 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
CCDC78-214ENST00000485091 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
CCDC78-214ENST00000485091 HERVK_113P63121 156 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms