RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 GDF5OSQ5U4N7 250 aa11.85□□□□□ -0.51
PCDH17-202ENST00000484979 M0QY20 66 aa11.85□□□□□ -0.51
PCDH17-202ENST00000484979 RBM3P98179 157 aaKnown RBP11.85□□□□□ -0.51
PCDH17-202ENST00000484979 H3BT86 120 aa11.84□□□□□ -0.51
PCDH17-202ENST00000484979 TEN1Q86WV5 123 aa11.84□□□□□ -0.51
PCDH17-202ENST00000484979 TMEM256-PLSCR3K7ERE1 68 aa11.84□□□□□ -0.51
PCDH17-202ENST00000484979 Q6ZS46 218 aa11.84□□□□□ -0.51
PCDH17-202ENST00000484979 Q8N976 141 aa11.83□□□□□ -0.52
PCDH17-202ENST00000484979 MIAQ16674 131 aa11.83□□□□□ -0.52
PCDH17-202ENST00000484979 BBC3Q96PG8 261 aaPredicted RBP11.82□□□□□ -0.52
PCDH17-202ENST00000484979 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
PCDH17-202ENST00000484979 RBX1P62877 108 aa11.82□□□□□ -0.52
PCDH17-202ENST00000484979 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
PCDH17-202ENST00000484979 A0A1B0GX51 115 aa11.82□□□□□ -0.52
PCDH17-202ENST00000484979 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
PCDH17-202ENST00000484979 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
PCDH17-202ENST00000484979 MP68P56378 58 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 CDPF1Q6NVV7 123 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 UTRNP46939 3433 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 TRBV6-5A0A0K0K1A5 114 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 CRIP1P50238 77 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 KLLNB2CW77 178 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 HIST2H2BDQ6DRA6 164 aa11.81□□□□□ -0.52
PCDH17-202ENST00000484979 A0A087WZ39 114 aa11.8□□□□□ -0.52
PCDH17-202ENST00000484979 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
PCDH17-202ENST00000484979 A0A0J9YXY3 114 aa11.8□□□□□ -0.52
PCDH17-202ENST00000484979 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
PCDH17-202ENST00000484979 WFDC10AQ9H1F0 79 aa11.79□□□□□ -0.52
PCDH17-202ENST00000484979 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
PCDH17-202ENST00000484979 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
PCDH17-202ENST00000484979 ZNF22P17026 224 aaPredicted RBP11.78□□□□□ -0.52
PCDH17-202ENST00000484979 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
PCDH17-202ENST00000484979 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
PCDH17-202ENST00000484979 SMR3AQ99954 134 aa11.78□□□□□ -0.52
PCDH17-202ENST00000484979 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
PCDH17-202ENST00000484979 LELP1Q5T871 98 aa11.77□□□□□ -0.52
PCDH17-202ENST00000484979 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.53
PCDH17-202ENST00000484979 A0A1W2PPR1 153 aa11.77□□□□□ -0.53
PCDH17-202ENST00000484979 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
PCDH17-202ENST00000484979 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
PCDH17-202ENST00000484979 IGHV4-30-4P0DP06 118 aa11.76□□□□□ -0.53
PCDH17-202ENST00000484979 PIK3CD-AS1Q5SR53 167 aa11.76□□□□□ -0.53
PCDH17-202ENST00000484979 CLEC2BQ92478 149 aa11.76□□□□□ -0.53
PCDH17-202ENST00000484979 LRP4O75096 1905 aa11.75□□□□□ -0.53
PCDH17-202ENST00000484979 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
PCDH17-202ENST00000484979 NUP210LQ5VU65 1888 aa11.75□□□□□ -0.53
PCDH17-202ENST00000484979 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
PCDH17-202ENST00000484979 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
PCDH17-202ENST00000484979 PROK1P58294 105 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 FAM19A1Q7Z5A9 133 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 WFDC2Q14508 124 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
PCDH17-202ENST00000484979 ODF3L2Q3SX64 289 aa11.73□□□□□ -0.53
PCDH17-202ENST00000484979 CRIP2P52943 208 aaPredicted RBP11.72□□□□□ -0.53
PCDH17-202ENST00000484979 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
PCDH17-202ENST00000484979 H0Y9J4 135 aa11.72□□□□□ -0.53
PCDH17-202ENST00000484979 USP24Q9UPU5 2620 aa11.72□□□□□ -0.53
PCDH17-202ENST00000484979 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
PCDH17-202ENST00000484979 RNF185Q96GF1 192 aa11.71□□□□□ -0.53
PCDH17-202ENST00000484979 C9orf85Q96MD7 179 aa11.71□□□□□ -0.53
PCDH17-202ENST00000484979 IGKV2D-26A0A0A0MRZ7 120 aa11.71□□□□□ -0.53
PCDH17-202ENST00000484979 A0A096LNI7 61 aa11.71□□□□□ -0.54
PCDH17-202ENST00000484979 TMEM223A0PJW6 202 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
PCDH17-202ENST00000484979 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 ZNF580Q9UK33 172 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
PCDH17-202ENST00000484979 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
PCDH17-202ENST00000484979 ATOX1O00244 68 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
PCDH17-202ENST00000484979 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
PCDH17-202ENST00000484979 TMEM258P61165 79 aa11.69□□□□□ -0.54
PCDH17-202ENST00000484979 PRR9Q5T870 116 aa11.69□□□□□ -0.54
PCDH17-202ENST00000484979 CHKB-CPT1BH3BT56 60 aa11.68□□□□□ -0.54
PCDH17-202ENST00000484979 BRI3O95415 125 aa11.68□□□□□ -0.54
PCDH17-202ENST00000484979 LY6G6CO95867 125 aa11.68□□□□□ -0.54
PCDH17-202ENST00000484979 U3KQK5 164 aa11.68□□□□□ -0.54
PCDH17-202ENST00000484979 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
PCDH17-202ENST00000484979 FAM19A5Q7Z5A7 132 aaPredicted RBP11.68□□□□□ -0.54
PCDH17-202ENST00000484979 TNRC6BQ9UPQ9 1833 aaKnown RBP11.67□□□□□ -0.54
PCDH17-202ENST00000484979 BPY2O14599 106 aa11.67□□□□□ -0.54
PCDH17-202ENST00000484979 MUC4Q99102 2169 aa11.67□□□□□ -0.54
PCDH17-202ENST00000484979 TSHBP01222 138 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 M0R2N4 97 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
PCDH17-202ENST00000484979 FOXI1Q12951 378 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 SMIM20Q8N5G0 67 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 MAST4O15021 2626 aa11.66□□□□□ -0.54
PCDH17-202ENST00000484979 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
PCDH17-202ENST00000484979 NRACQ8N912 160 aa11.65□□□□□ -0.54
PCDH17-202ENST00000484979 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms