RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
SND1-211ENST00000484767 NDUFV3P56181 108 aaKnown RBP6.66□□□□□ -1.34
SND1-211ENST00000484767 HERV-K104P63124 156 aa6.66□□□□□ -1.34
SND1-211ENST00000484767 TTC32Q5I0X7 151 aa6.66□□□□□ -1.34
SND1-211ENST00000484767 C11orf72Q8NBR9 251 aa6.66□□□□□ -1.34
SND1-211ENST00000484767 SPENQ96T58 3664 aaKnown RBP6.65□□□□□ -1.34
SND1-211ENST00000484767 A0A096LNT2 108 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 TNP2Q05952 138 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 DGAT2L7PQ6IED9 249 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 C10orf99Q6UWK7 81 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 C4orf3Q8WVX3 66 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 TMEM101Q96IK0 257 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
SND1-211ENST00000484767 BEX4Q9NWD9 120 aaPredicted RBP6.65□□□□□ -1.34
SND1-211ENST00000484767 POLQO75417 2590 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 FBN2P35556 2912 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 RBMY1BA6NDE4 496 aaKnown RBP6.64□□□□□ -1.35
SND1-211ENST00000484767 RBMY1EA6NEQ0 496 aaKnown RBP6.64□□□□□ -1.35
SND1-211ENST00000484767 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 COX7A2LO14548 114 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 TRACP01848 142 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 PF4P02776 101 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 RBMY1DP0C7P1 496 aaKnown RBP6.64□□□□□ -1.35
SND1-211ENST00000484767 PROK1P58294 105 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 LINC01587Q99440 93 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 MAP6D1Q9H9H5 199 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 CDKN2A-AS1Q9UH64 79 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 NBASA2RRP1 2371 aa6.64□□□□□ -1.35
SND1-211ENST00000484767 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 IGHV3-73A0A0B4J1V6 119 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 TRAV4A0A0B4J268 109 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE12JA6NER3 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE7O76087 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 NHLRC4P0CG21 123 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE12FP0CL80 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE12GP0CL81 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE12IP0CL82 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 CMC4P56277 68 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 GAGE4Q13068 117 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 CEMP1Q6PRD7 247 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 Q6ZSN1 163 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 DAZ4Q86SG3 579 aaKnown RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 HRNRQ86YZ3 2850 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 DYNLRB2Q8TF09 96 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 CITED2Q99967 270 aaPredicted RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
SND1-211ENST00000484767 DAZ3Q9NR90 486 aaKnown RBP6.63□□□□□ -1.35
SND1-211ENST00000484767 RELNP78509 3460 aa6.62□□□□□ -1.35
SND1-211ENST00000484767 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
SND1-211ENST00000484767 RPL36AP83881 106 aaKnown RBP6.62□□□□□ -1.35
SND1-211ENST00000484767 SHISA2Q6UWI4 295 aa6.62□□□□□ -1.35
SND1-211ENST00000484767 RPL36ALQ969Q0 106 aaKnown RBP6.62□□□□□ -1.35
SND1-211ENST00000484767 NBPF19A0A087WUL8 3843 aa6.62□□□□□ -1.35
SND1-211ENST00000484767 HIVEP3Q5T1R4 2406 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 MED13LQ71F56 2210 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 SLURP1P55000 103 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 DEFB114Q30KQ6 69 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 RNASE13Q5GAN3 156 aaKnown RBP6.61□□□□□ -1.35
SND1-211ENST00000484767 LINC00242Q5T6M2 205 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 TMEM86BQ8N661 226 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 CLEC2BQ92478 149 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 Q9H8V8 135 aa6.61□□□□□ -1.35
SND1-211ENST00000484767 SMIM1B2RUZ4 78 aa6.6□□□□□ -1.35
SND1-211ENST00000484767 K7EQD1 137 aa6.6□□□□□ -1.35
SND1-211ENST00000484767 CRLF1O75462 422 aa6.6□□□□□ -1.35
SND1-211ENST00000484767 HTN1P15515 57 aa6.6□□□□□ -1.35
SND1-211ENST00000484767 ZNF625Q96I27 306 aaPredicted RBP6.6□□□□□ -1.35
SND1-211ENST00000484767 SETD2Q9BYW2 2564 aaPredicted RBP6.59□□□□□ -1.35
SND1-211ENST00000484767 TRAV13-2A0A0B4J235 113 aa6.59□□□□□ -1.35
SND1-211ENST00000484767 ATP5G1P05496 136 aa6.59□□□□□ -1.35
SND1-211ENST00000484767 DAND5Q8N907 189 aa6.59□□□□□ -1.35
SND1-211ENST00000484767 BOD1L1Q8NFC6 3051 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 IGHV3-38A0A0C4DH36 116 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 A8MZ25 164 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 F5H768 121 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 INAFM2P0DMQ5 153 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 IGHV4-31P0DP07 118 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 COX6A2Q02221 97 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 HIST2H2BCQ6DN03 193 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 LRRC75A-AS1Q8N1F1 130 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 CDC42SE2Q9NRR3 84 aa6.58□□□□□ -1.36
SND1-211ENST00000484767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.58□□□□□ -1.361e-7■■■■■ 34.9
SND1-211ENST00000484767 UTP20O75691 2785 aaKnown RBP6.57□□□□□ -1.36
SND1-211ENST00000484767 CXCL5P42830 114 aa6.57□□□□□ -1.36
SND1-211ENST00000484767 RPL28P46779 137 aaKnown RBP6.57□□□□□ -1.36
SND1-211ENST00000484767 NPC2P61916 151 aa6.57□□□□□ -1.36
SND1-211ENST00000484767 MEIG1Q5JSS6 88 aa6.57□□□□□ -1.36
SND1-211ENST00000484767 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
SND1-211ENST00000484767 STHQ8IWL8 128 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms