RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
SMAD9-204ENST00000483941 PET117Q6UWS5 81 aa9.68□□□□□ -0.86
SMAD9-204ENST00000483941 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
SMAD9-204ENST00000483941 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
SMAD9-204ENST00000483941 MRPL52Q86TS9 123 aaKnown RBP9.68□□□□□ -0.86
SMAD9-204ENST00000483941 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
SMAD9-204ENST00000483941 IGLL5B9A064 214 aa9.67□□□□□ -0.86
SMAD9-204ENST00000483941 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
SMAD9-204ENST00000483941 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
SMAD9-204ENST00000483941 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
SMAD9-204ENST00000483941 SYS1-DBNDD2H3BUS1 97 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 FGF6P10767 208 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 CCL18P55774 89 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
SMAD9-204ENST00000483941 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
SMAD9-204ENST00000483941 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 VCX2Q9H322 139 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
SMAD9-204ENST00000483941 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
SMAD9-204ENST00000483941 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
SMAD9-204ENST00000483941 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
SMAD9-204ENST00000483941 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
SMAD9-204ENST00000483941 A0A087WX48 190 aa9.64□□□□□ -0.87
SMAD9-204ENST00000483941 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
SMAD9-204ENST00000483941 PMVKQ15126 192 aa9.64□□□□□ -0.87
SMAD9-204ENST00000483941 SCGB1D1O95968 90 aa9.63□□□□□ -0.87
SMAD9-204ENST00000483941 GAGE6Q13070 117 aa9.63□□□□□ -0.87
SMAD9-204ENST00000483941 JOSD1Q15040 202 aaPredicted RBP9.63□□□□□ -0.87
SMAD9-204ENST00000483941 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
SMAD9-204ENST00000483941 TEX43Q6ZNM6 134 aa9.63□□□□□ -0.87
SMAD9-204ENST00000483941 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
SMAD9-204ENST00000483941 ZNF664Q8N3J9 261 aa9.62□□□□□ -0.87
SMAD9-204ENST00000483941 BAALCQ8WXS3 180 aa9.62□□□□□ -0.87
SMAD9-204ENST00000483941 IGLV4-3A0A075B6K6 122 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 LY6G6CO95867 125 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 SEC11AP67812 179 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 ESRGQ1W209 222 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 PKHD1P08F94 4074 aa9.61□□□□□ -0.87
SMAD9-204ENST00000483941 H0Y8G0 127 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 CCL25O15444 150 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 SMIM6P0DI80 62 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 PLNP26678 52 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 CST9LQ9H4G1 147 aa9.6□□□□□ -0.87
SMAD9-204ENST00000483941 PRSS29PA6NIE9 313 aa9.59□□□□□ -0.87
SMAD9-204ENST00000483941 F8VRH5 84 aa9.59□□□□□ -0.87
SMAD9-204ENST00000483941 AMELXQ99217 191 aa9.59□□□□□ -0.87
SMAD9-204ENST00000483941 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
SMAD9-204ENST00000483941 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
SMAD9-204ENST00000483941 K7EP13 123 aa9.58□□□□□ -0.88
SMAD9-204ENST00000483941 RBX1P62877 108 aa9.58□□□□□ -0.88
SMAD9-204ENST00000483941 UPK3BQ9BT76 320 aa9.58□□□□□ -0.88
SMAD9-204ENST00000483941 APLNQ9ULZ1 77 aa9.58□□□□□ -0.88
SMAD9-204ENST00000483941 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
SMAD9-204ENST00000483941 DPM2O94777 84 aa9.57□□□□□ -0.88
SMAD9-204ENST00000483941 S100A12P80511 92 aa9.57□□□□□ -0.88
SMAD9-204ENST00000483941 ODF1Q14990 250 aa9.57□□□□□ -0.88
SMAD9-204ENST00000483941 Q6ZUT4 128 aa9.57□□□□□ -0.88
SMAD9-204ENST00000483941 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
SMAD9-204ENST00000483941 IGKCP01834 107 aa9.56□□□□□ -0.88
SMAD9-204ENST00000483941 MPV17L2Q567V2 206 aa9.56□□□□□ -0.88
SMAD9-204ENST00000483941 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
SMAD9-204ENST00000483941 UBE2DNLQ8IWF7 75 aa9.56□□□□□ -0.88
SMAD9-204ENST00000483941 OPRPNQ99935 248 aaPredicted RBP9.56□□□□□ -0.88
SMAD9-204ENST00000483941 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
SMAD9-204ENST00000483941 PYY3Q5JQD4 70 aa9.55□□□□□ -0.88
SMAD9-204ENST00000483941 MRPL35Q9NZE8 188 aaKnown RBP9.55□□□□□ -0.88
SMAD9-204ENST00000483941 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
SMAD9-204ENST00000483941 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
SMAD9-204ENST00000483941 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 SIVA1O15304 175 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 HERVK_113P63121 156 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 SS18Q15532 418 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 C10orf126Q8N4M7 172 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 Q8N976 141 aa9.54□□□□□ -0.88
SMAD9-204ENST00000483941 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
SMAD9-204ENST00000483941 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 CRPP02741 224 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 IGLC3P0DOY3 106 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 UBE2D1P51668 147 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
SMAD9-204ENST00000483941 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 H3BRM9 83 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 REG3AQ06141 175 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 WFDC10BQ8IUB3 73 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
SMAD9-204ENST00000483941 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
SMAD9-204ENST00000483941 HERVK_113P61574 105 aa9.51□□□□□ -0.89
SMAD9-204ENST00000483941 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms