RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
CLK3-204ENST00000483723 DNAH3Q8TD57 4116 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 E9PLD3 99 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 K7EIL1 84 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 M0R143 59 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 SIVA1O15304 175 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 NMUP48645 174 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 Q6ZUT4 128 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 C2orf91Q6ZV80 131 aa9.8□□□□□ -0.84
CLK3-204ENST00000483723 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
CLK3-204ENST00000483723 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
CLK3-204ENST00000483723 NBEAL2Q6ZNJ1 2754 aa9.79□□□□□ -0.84
CLK3-204ENST00000483723 TCTAP57738 103 aa9.79□□□□□ -0.84
CLK3-204ENST00000483723 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
CLK3-204ENST00000483723 EREGO14944 169 aa9.78□□□□□ -0.84
CLK3-204ENST00000483723 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
CLK3-204ENST00000483723 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
CLK3-204ENST00000483723 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
CLK3-204ENST00000483723 CDC42SE2Q9NRR3 84 aa9.78□□□□□ -0.84
CLK3-204ENST00000483723 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
CLK3-204ENST00000483723 F5H768 121 aa9.77□□□□□ -0.85
CLK3-204ENST00000483723 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
CLK3-204ENST00000483723 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
CLK3-204ENST00000483723 UBE2D1P51668 147 aa9.77□□□□□ -0.85
CLK3-204ENST00000483723 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.85
CLK3-204ENST00000483723 MAPKAPK5-AS1Q8N8E1 139 aa9.77□□□□□ -0.85
CLK3-204ENST00000483723 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
CLK3-204ENST00000483723 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 TIRAPP58753 221 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 A0A0J9YY99 117 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 UBE2L6O14933 153 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 PRB2P02812 416 aaPredicted RBP9.76□□□□□ -0.85
CLK3-204ENST00000483723 HERVK_113P61574 105 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 OR5A1Q8NGJ0 315 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
CLK3-204ENST00000483723 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
CLK3-204ENST00000483723 AMMECR1LQ6DCA0 310 aa9.74□□□□□ -0.85
CLK3-204ENST00000483723 SH2D6Q7Z4S9 175 aa9.74□□□□□ -0.85
CLK3-204ENST00000483723 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
CLK3-204ENST00000483723 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
CLK3-204ENST00000483723 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 H3BNG1 76 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 GAGE6Q13070 117 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 HTN3P15516 51 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
CLK3-204ENST00000483723 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 LEPROTO15243 131 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 SEC11AP67812 179 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 LINC00242Q5T6M2 205 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 NBEAL1Q6ZS30 2694 aa9.72□□□□□ -0.85
CLK3-204ENST00000483723 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.85
CLK3-204ENST00000483723 A0A096LPF7 62 aa9.71□□□□□ -0.85
CLK3-204ENST00000483723 HINT1P49773 126 aaPredicted RBP9.71□□□□□ -0.85
CLK3-204ENST00000483723 DEFB121Q5J5C9 76 aa9.71□□□□□ -0.85
CLK3-204ENST00000483723 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
CLK3-204ENST00000483723 Q6ZTC4 211 aa9.7□□□□□ -0.86
CLK3-204ENST00000483723 TSPEAR-AS2P59090 65 aa9.7□□□□□ -0.86
CLK3-204ENST00000483723 HERVK_113P63121 156 aa9.7□□□□□ -0.86
CLK3-204ENST00000483723 COX6A2Q02221 97 aa9.7□□□□□ -0.86
CLK3-204ENST00000483723 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
CLK3-204ENST00000483723 J3QQQ9 107 aa9.69□□□□□ -0.86
CLK3-204ENST00000483723 HSD52Q0P140 79 aa9.69□□□□□ -0.86
CLK3-204ENST00000483723 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
CLK3-204ENST00000483723 PLEKHB2Q96CS7 222 aa9.69□□□□□ -0.86
CLK3-204ENST00000483723 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 LELP1Q5T871 98 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 ZNF815PA8K554 130 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 RBX1P62877 108 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 BATFQ16520 125 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
CLK3-204ENST00000483723 IGHV3-30-3P0DP02 117 aa9.67□□□□□ -0.86
CLK3-204ENST00000483723 NANOS2P60321 138 aaKnown RBP9.67□□□□□ -0.86
CLK3-204ENST00000483723 TAL2Q16559 108 aa9.67□□□□□ -0.86
CLK3-204ENST00000483723 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
CLK3-204ENST00000483723 MRAPQ8TCY5 172 aa9.67□□□□□ -0.86
CLK3-204ENST00000483723 H3BRM9 83 aa9.66□□□□□ -0.86
CLK3-204ENST00000483723 LGALS3P17931 250 aaKnown RBP9.66□□□□□ -0.86
CLK3-204ENST00000483723 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
CLK3-204ENST00000483723 TRAV8-3A0A0A6YYJ7 113 aa9.65□□□□□ -0.86
CLK3-204ENST00000483723 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
CLK3-204ENST00000483723 DEFB131BA0A096LNP1 70 aa9.65□□□□□ -0.87
CLK3-204ENST00000483723 IGLV5-39A0A0G2JS06 123 aa9.65□□□□□ -0.87
CLK3-204ENST00000483723 ORAOV1Q8WV07 137 aa9.65□□□□□ -0.87
CLK3-204ENST00000483723 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
CLK3-204ENST00000483723 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
CLK3-204ENST00000483723 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
CLK3-204ENST00000483723 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms