RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 IGHV4-59P01825 116 aa9.21□□□□□ -0.94
LINC00477-201ENST00000483544 MUC4Q99102 2169 aa9.21□□□□□ -0.94
LINC00477-201ENST00000483544 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 TRBV27A0A0K0K1C4 114 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 H7C423 109 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
LINC00477-201ENST00000483544 RHOHQ15669 191 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 Q6YL49 198 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
LINC00477-201ENST00000483544 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 IGHV1OR15-1A0A075B7D0 117 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 DEFB1P60022 68 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 PIK3CD-AS1Q5SR53 167 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 SUMO4Q6EEV6 95 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 CYSTM1Q9H1C7 97 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 C16orf95Q9H693 158 aa9.19□□□□□ -0.94
LINC00477-201ENST00000483544 BEX4Q9NWD9 120 aaPredicted RBP9.19□□□□□ -0.94
LINC00477-201ENST00000483544 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
LINC00477-201ENST00000483544 A8MTW9 85 aa9.18□□□□□ -0.94
LINC00477-201ENST00000483544 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
LINC00477-201ENST00000483544 SPTAN1Q13813 2472 aaKnown RBP9.18□□□□□ -0.94
LINC00477-201ENST00000483544 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 Q8N2B8 174 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 DAND5Q8N907 189 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 ZNF702PQ9H963 129 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 NSUN5P1Q3KNT7 163 aa9.17□□□□□ -0.94
LINC00477-201ENST00000483544 ABCA12Q86UK0 2595 aa9.16□□□□□ -0.94
LINC00477-201ENST00000483544 F5H697 171 aa9.16□□□□□ -0.94
LINC00477-201ENST00000483544 COX6CP09669 75 aa9.16□□□□□ -0.94
LINC00477-201ENST00000483544 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
LINC00477-201ENST00000483544 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
LINC00477-201ENST00000483544 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
LINC00477-201ENST00000483544 TIRAPP58753 221 aa9.15□□□□□ -0.94
LINC00477-201ENST00000483544 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
LINC00477-201ENST00000483544 LST1O00453 97 aa9.14□□□□□ -0.95
LINC00477-201ENST00000483544 IGHV4-31P0DP07 118 aa9.14□□□□□ -0.95
LINC00477-201ENST00000483544 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
LINC00477-201ENST00000483544 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
LINC00477-201ENST00000483544 M0QY20 66 aa9.14□□□□□ -0.95
LINC00477-201ENST00000483544 PRRC2AP48634 2157 aaKnown RBP9.13□□□□□ -0.95
LINC00477-201ENST00000483544 SPRY2O43597 315 aa9.13□□□□□ -0.95
LINC00477-201ENST00000483544 CD164Q04900 197 aa9.13□□□□□ -0.95
LINC00477-201ENST00000483544 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
LINC00477-201ENST00000483544 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
LINC00477-201ENST00000483544 RELNP78509 3460 aa9.13□□□□□ -0.95
LINC00477-201ENST00000483544 C2CD3Q4AC94 2353 aa9.12□□□□□ -0.95
LINC00477-201ENST00000483544 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
LINC00477-201ENST00000483544 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
LINC00477-201ENST00000483544 A0A087WWL8 130 aa9.12□□□□□ -0.95
LINC00477-201ENST00000483544 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
LINC00477-201ENST00000483544 LAMTOR3Q9UHA4 124 aa9.12□□□□□ -0.95
LINC00477-201ENST00000483544 I3L3M4 83 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 TRIAP1O43715 76 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 TSHBP01222 138 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 CR1P17927 2039 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 Q1RN00 199 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 Q6JHZ5 121 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 C10orf99Q6UWK7 81 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 C4orf3Q8WVX3 66 aa9.11□□□□□ -0.95
LINC00477-201ENST00000483544 A8MZ25 164 aa9.1□□□□□ -0.95
LINC00477-201ENST00000483544 EIF4EBP3O60516 100 aaPredicted RBP9.1□□□□□ -0.95
LINC00477-201ENST00000483544 DEFB113Q30KQ7 82 aa9.1□□□□□ -0.95
LINC00477-201ENST00000483544 FBN2P35556 2912 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 PMAIP1Q13794 54 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 FAM74A4Q5TZK3 123 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 C20orf203Q8NBC4 194 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
LINC00477-201ENST00000483544 DOPEY2Q9Y3R5 2298 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 LEPROTO15243 131 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 IGKV3-20P01619 116 aa9.08□□□□□ -0.96
LINC00477-201ENST00000483544 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
LINC00477-201ENST00000483544 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
LINC00477-201ENST00000483544 BCE1O60756 84 aa9.07□□□□□ -0.96
LINC00477-201ENST00000483544 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
LINC00477-201ENST00000483544 AMELXQ99217 191 aa9.07□□□□□ -0.96
LINC00477-201ENST00000483544 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
LINC00477-201ENST00000483544 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
LINC00477-201ENST00000483544 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
LINC00477-201ENST00000483544 DEFB131AP59861 70 aa9.06□□□□□ -0.96
LINC00477-201ENST00000483544 FHL2Q14192 279 aa9.06□□□□□ -0.96
LINC00477-201ENST00000483544 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
LINC00477-201ENST00000483544 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
LINC00477-201ENST00000483544 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
LINC00477-201ENST00000483544 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
LINC00477-201ENST00000483544 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
LINC00477-201ENST00000483544 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
LINC00477-201ENST00000483544 VSIG2Q96IQ7 327 aa9.05□□□□□ -0.96
LINC00477-201ENST00000483544 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
LINC00477-201ENST00000483544 SLURP1P55000 103 aa9.04□□□□□ -0.96
LINC00477-201ENST00000483544 Q6ZRU5 148 aa9.04□□□□□ -0.96
LINC00477-201ENST00000483544 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
LINC00477-201ENST00000483544 WFDC11Q8NEX6 87 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms